ggKbase home page

13_1_40cm_3_scaffold_2242_4

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(3576..4292)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A695_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 177.0
  • Bit_score: 112
  • Evalue 5.50e-22
AraC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 183.0
  • Bit_score: 148
  • Evalue 1.60e-32
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 177.0
  • Bit_score: 112
  • Evalue 1.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGAAGGCCGCCGCCGCGAGCGCCTATCCGGTCGTGCCGGTCTTTCATCCCCGCCGGGAGGCGCGGCGGGCGGTGAAGCGCGGTTATCCGCGCGGCAGCGGCACTGTGCGCCTGTGTCGCAGCGTTCAGGCGGTCAAACAACTCCTCGAACAGCGGCTCGTGGACGCGGTTGTGCTCGACGTGCGCCATTGTGATGGCGATGGGTTGGCATTGCCAGCGTCCTTTCCGCGCATCCCGATGTATGCGCTCTCGGCGGTGCGGCCGGACGATGGCGCGTTGCTCGCGTCCTGCCGCGATGCCGGCTTCACCGGCGTGCTCGTCGAAGGCGTGGACAACGCCGTCGCCGGCGAGTGGATCGCCGCGCGTACCGCACAGGTCGCGCGGCGTGTGGCGCTTGCCGATGCGCCCCGGCTCCTGCGCCTGACCGATCGGTTACAGCTCGCGGCCTGGGAAGAGGTGTTGCGCCGGGCAGGCAGGCCGATCAAGACGGGCCACGTCGCCGCGGCGCTGCGCGTGACCCGCGAGCATCTGTCGCGCGAATTCGGGGCTGCGCCGCGGATCTGCTTGGCAACCCGGGGTACACGGTTCGCGGCGTCGTTCGCATCCTCGGCTATGCGTCGCCGAGCCATTTGGCGGGGGCGGCGCGGCGCGTTGCCGGGGCAACGCCGGTCGAGCTGCGAGAGCTGGGGCCTCGAGGCGTGCTTACTCGATTCCTGA
PROTEIN sequence
Length: 239
MKAAAASAYPVVPVFHPRREARRAVKRGYPRGSGTVRLCRSVQAVKQLLEQRLVDAVVLDVRHCDGDGLALPASFPRIPMYALSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQVARRVALADAPRLLRLTDRLQLAAWEEVLRRAGRPIKTGHVAAALRVTREHLSREFGAAPRICLATRGTRFAASFASSAMRRRAIWRGRRGALPGQRRSSCESWGLEACLLDS*