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13_1_40cm_3_scaffold_1251

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1251_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(86..571)
DNA (486bp) protein (162aa)
Protein of unknown function DUF4390
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_1251_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(689..2416)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A630_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_1251_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2413..3831)
DNA (1419bp) protein (473aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A631_GEMAT
putative NtrC family two-component response regulator
Putative NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37691.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemm
13_1_40cm_3_scaffold_1251_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3828..5036)
DNA (1209bp) protein (403aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A634_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative two-component histidine kinase
13_1_40cm_3_scaffold_1251_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5093..5512
DNA (420bp) protein (140aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q093R0_STIAD
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function UPF0047
13_1_40cm_3_scaffold_1251_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5523..5948
DNA (426bp) protein (142aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91606.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1251_7
unknown

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5950..6219
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_1251_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6234..6614
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A3308
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABF41720.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_1_40cm_3_scaffold_1251_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6785..8224
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBN2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH51306.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
13_1_40cm_3_scaffold_1251_10
unknown

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8259..8702
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_3_scaffold_1251_11
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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8753..9142
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4J9_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV84823.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
13_1_40cm_3_scaffold_1251_12
RLO_RIF05_58_11, RIF5, Bacteria

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9148..9792
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGQ2_ANADE
hypothetical protein; K08984 putative membrane protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein
13_1_40cm_3_scaffold_1251_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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9776..10138
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D6B08
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_3_scaffold_1251_14
unknown

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10128..10481
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_3_scaffold_1251_15
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10498..11121
DNA (624bp) protein (208aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiof
Carbonic anhydrase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GS34_9GAMM
carbonic anhydrase
13_1_40cm_3_scaffold_1251_16
unknown

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11118..11414
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_3_scaffold_1251_17
unknown

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11411..11677
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_1251_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11772..12410
DNA (639bp) protein (213aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WU2_SOLUE
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:AHG93554.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1251_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12545..13051
DNA (507bp) protein (169aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WU2_SOLUE
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:AHG93554.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1251_20
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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13000..13890
DNA (891bp) protein (297aa)
Glycoside hydrolase family 16 id=2112728 bin=GWB2_Chloroflexi_54_36 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
glycoside hydrolase family protein Tax=GWB2_Chloroflexi_54_36_curated
glycoside hydrolase family 16
13_1_40cm_3_scaffold_1251_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13930..14112
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93467.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1251_22
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14183..14497
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ87_METS0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIF81370.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
13_1_40cm_3_scaffold_1251_23

Not on your lists

14494..15018
DNA (525bp) protein (175aa)
putative GCN5-related N-acetyltransferase id=12554023 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GCN5-related N-acetyltransferase
Marine sediment metagenome DNA, contig: S06H3_S02778 {ECO:0000313|EMBL:GAI21775.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_1251_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15347..15535
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
Displaying 24 items

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