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13_1_40cm_3_scaffold_1163

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1163_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..302)
DNA (300bp) protein (100aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CD46_PSEAI
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EWY37536.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanel
putative flavoprotein
13_1_40cm_3_scaffold_1163_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

388..822
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC79_GEMAT
protein of unknown function DUF1094
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1163_3
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(819..1580)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_1_40cm_3_scaffold_1163_4

Not on your lists

comp(1577..2800)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AAO91891.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_1163_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2996..3319
DNA (324bp) protein (108aa)
Chaperonin, 10 kDa n=1 Tax=uncultured marine bacterium Ant4D5 RepID=Q2PXZ9_9BACT
groES; putative 10 kDa chaperonin Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperonin Cpn10
13_1_40cm_3_scaffold_1163_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3312..3629
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1163_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3717..3977
DNA (261bp) protein (87aa)
S23 ribosomal protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1163_8
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(3906..4703)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Acinetobacter tandoii DSM 14970 = CIP 107469 RepID=R9B9V0_9GAMM
PF06210 family protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_1163_9
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4715..6037)
DNA (1323bp) protein (441aa)
peptidase S9 prolyl oligopeptidase (EC:3.4.21.26)
Peptidase S9A, prolyl oligopeptidase domain protein beta-propeller n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J297_NOSP7
Prolyl endopeptidase {ECO:0000313|EMBL:KIJ81437.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
13_1_40cm_3_scaffold_1163_10
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

comp(6027..6830)
DNA (804bp) protein (268aa)
Serine protease, S9A family peptidase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TNK7_9CYAN
prolyl endopeptidase Tax=CG_Cyano_01
serine protease, S9A family peptidase
13_1_40cm_3_scaffold_1163_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6930..8063
DNA (1134bp) protein (378aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAH38744.1}; EC=3.6.1.- {ECO:0000313|EMBL:BAH38744.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmati
ATP-dependent DNA helicase RecQ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A934_GEMAT rbh
13_1_40cm_3_scaffold_1163_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8342..9121
DNA (780bp) protein (260aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
13_1_40cm_3_scaffold_1163_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9121..9216
DNA (96bp) protein (32aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_1163_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9412..11034
DNA (1623bp) protein (541aa)
cafA; ribonuclease G (EC:3.1.-.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT rbh
13_1_40cm_3_scaffold_1163_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


11069..11386
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplU; 50S ribosomal protein L21
13_1_40cm_3_scaffold_1163_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


11394..11672
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UHP8_CYAP2
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L27
13_1_40cm_3_scaffold_1163_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12157..13365)
DNA (1209bp) protein (403aa)
Amidohydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT89_HALO1
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1163_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13362..14807)
DNA (1446bp) protein (482aa)
Amidohydrolase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QIL3_BREDI
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1163_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14818..16944)
DNA (2127bp) protein (709aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16 domain-containing protein
13_1_40cm_3_scaffold_1163_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16941..18296)
DNA (1356bp) protein (452aa)
putative zinc protease y4wA (EC:3.4.24.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative zinc protease y4wA (EC:3.4.24.-)
Putative zinc protease y4wA n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KG89_9BACT
13_1_40cm_3_scaffold_1163_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18304..19140)
DNA (837bp) protein (279aa)
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amidohydrolase 2
amidohydrolase; K07045 id=1247849 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_3_scaffold_1163_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19155..20003)
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1 rbh
13_1_40cm_3_scaffold_1163_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20000..20689)
DNA (690bp) protein (230aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_1_40cm_3_scaffold_1163_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20692..20913)
DNA (222bp) protein (74aa)
benzoyl-CoA oxygenase subunit BoxB; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Benzoyl-CoA oxygenase component B n=1 Tax=mine drainage metagenome RepID=E6Q409_9ZZZZ
Displaying 24 items

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