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13_1_40cm_3_scaffold_1148

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1148_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..2042)
DNA (2040bp) protein (680aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90514.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1148_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2039..2650)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF4159
13_1_40cm_3_scaffold_1148_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2647..3480)
DNA (834bp) protein (278aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6H8_MYXXD
tetrapyrrole methylase
13_1_40cm_3_scaffold_1148_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3482..4504)
DNA (1023bp) protein (341aa)
alias=gwe2_scaffold_8_567 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alias=gwe2_scaffold_8_567 id=7202228 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_3_scaffold_1148_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4523..4855)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1148_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4896..5303
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_40cm_3_scaffold_1148_7
unknown

Not on your lists

comp(5319..5696)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_3_scaffold_1148_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5909..6514
DNA (606bp) protein (202aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_40cm_3_scaffold_1148_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6527..8191
DNA (1665bp) protein (555aa)
Hpt domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_1148_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8274..9227
DNA (954bp) protein (318aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
hypothetical membrane protein; K07027 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_1148_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9224..10117
DNA (894bp) protein (298aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ISPE_SOLUE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_40cm_3_scaffold_1148_12
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(10155..11168)
DNA (1014bp) protein (338aa)
Ig domain protein group 2 domain protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM33_MEIRD
Ig domain-containing protein
Tax=CG_Bacteroid_01
13_1_40cm_3_scaffold_1148_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11220..12335)
DNA (1116bp) protein (372aa)
OmpA family protein n=1 Tax=Leptospira santarosai str. CBC523 RepID=M6RXA4_9LEPT
peptidoglycan-associated lipoprotein Tax=RBG_16_RIF_CHLX_70_13_curated
OmpA/MotB domain-containing protein
13_1_40cm_3_scaffold_1148_14
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12395..14869)
DNA (2475bp) protein (825aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_3_scaffold_1148_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14917..16638)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C rbh
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_40cm_3_scaffold_1148_16
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(16635..17327)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase Tax=CG_Elusi_04
Subunit A 3-oxoadipate CoA-transferase id=4917921 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate CoA-transferase
13_1_40cm_3_scaffold_1148_17
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17350..17667)
DNA (318bp) protein (106aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=GWC2_Elusimicrobia_65_9_curated
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_40cm_3_scaffold_1148_18
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18203..19534)
DNA (1332bp) protein (444aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
4-aminobutyrate aminotransferase
13_1_40cm_3_scaffold_1148_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(19531..21159)
DNA (1629bp) protein (543aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.-); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aldH; aldehyde dehydrogenase (EC:1.2.1.-)
1-pyrroline-5-carboxylate dehydrogenase 1 id=4917885 bin=GWA2_Elusimicrobia_66_18 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_3_scaffold_1148_20
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21156..22511)
DNA (1356bp) protein (452aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4917884 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
class III aminotransferase Tax=GWC2_Elusimicrobia_65_9_curated
class III aminotransferase
13_1_40cm_3_scaffold_1148_trna_1
unknown

Not on your lists

22591..22661
DNA (71bp)
transferRNA
13_1_40cm_3_scaffold_1148_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22685..23818)
DNA (1134bp) protein (378aa)
Phosphoesterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_3_scaffold_1148_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(23981..24934)
DNA (954bp) protein (318aa)
OmpA/MotB domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQG6_HALH1
OmpA/MotB domain-containing protein Tax=RBG_16_Planctomycetes_55_9_curated
OmpA/MotB domain-containing protein
13_1_40cm_3_scaffold_1148_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24931..25890)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q706Q9_PSEPU
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1148_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(25905..26927)
DNA (1023bp) protein (341aa)
OmpA/MotB domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KH38_9BACT
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
OmpA/MotB domain protein
13_1_40cm_3_scaffold_1148_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26945..28252)
DNA (1308bp) protein (436aa)
Fibronectin type III domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEJ9_9BACT
Fibronectin type III domain protein {ECO:0000313|EMBL:EEF61713.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision
VCBS repeat-containing protein
13_1_40cm_3_scaffold_1148_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28766..30340)
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TPR repeat-containing protein id=4790530 bin=GWC2_Methylomirabilis_70_16 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying 27 items

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