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13_1_40cm_3_scaffold_2486

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2486_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..577
DNA (576bp) protein (192aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A650_GEMAT
AraC family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
AraC family transcriptional regulator
13_1_40cm_3_scaffold_2486_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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574..990
DNA (417bp) protein (139aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R9_9BACT
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2486_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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987..1628
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_2486_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1692..2261
DNA (570bp) protein (190aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
13_1_40cm_3_scaffold_2486_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2242..3282
DNA (1041bp) protein (347aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protease HtpX homolog id=2725088 bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
htpX; heat shock protein HtpX
13_1_40cm_3_scaffold_2486_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3366..4607
DNA (1242bp) protein (414aa)
Glycerol-3-phosphate O-acyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNR6_9BURK
glycerol-3-phosphate acyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycerol-3-phosphate O-acyltransferase
13_1_40cm_3_scaffold_2486_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5215..5835)
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2486_8
unknown

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5881..6450
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_3_scaffold_2486_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6462..8444)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_2486_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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8770..8982
DNA (213bp) protein (71aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated
cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family) id=14624951 bin=bin5_DeltaP species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cold-shock DNA-binding domain-containing protein
13_1_40cm_3_scaffold_2486_11
unknown

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8979..9509
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_3_scaffold_2486_12
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9511..9822)
DNA (312bp) protein (104aa)
Putative ribosylglycohydrolase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YYW3_NOCFA
ribosylglycohydrolase
Putative ribosylglycohydrolase {ECO:0000313|EMBL:BAD56628.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152)
13_1_40cm_3_scaffold_2486_13

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comp(9890..10360)
DNA (471bp) protein (157aa)
ADP-ribosylglycohydrolase (EC:3.2.-.-)
ADP-ribosylglycohydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XEH5_9ARCH
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:ESS06429.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
13_1_40cm_3_scaffold_2486_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10487..11146
DNA (660bp) protein (220aa)
Putative enzyme (3.4.-) id=1974900 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
alpha/beta superfamily hydrolase
13_1_40cm_3_scaffold_2486_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11139..12008)
DNA (870bp) protein (290aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 15 items

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