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13_1_40cm_3_scaffold_4447

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4447_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..333
DNA (333bp) protein (111aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative pilin
13_1_40cm_3_scaffold_4447_2
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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411..1304
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WH83_9CYAN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFZ19775.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus s
13_1_40cm_3_scaffold_4447_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1304..2443
DNA (1140bp) protein (380aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF8_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
two-component histidine kinase
13_1_40cm_3_scaffold_4447_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2440..3897
DNA (1458bp) protein (486aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD02_ANAD2
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_3_scaffold_4447_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3894..4337
DNA (444bp) protein (148aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4447_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4334..4723
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4447_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4705..5607
DNA (903bp) protein (301aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4447_8
unknown

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5638..5781
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_3_scaffold_4447_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5799..6701
DNA (903bp) protein (301aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_4447_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6833..7837
DNA (1005bp) protein (335aa)
Putative type IV pilus assembly protein PilM n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF4_GEMAT
pilM; putative type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pilM; putative type IV pilus assembly protein PilM
13_1_40cm_3_scaffold_4447_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7834..8547
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_4447_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8557..9204
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF2_GEMAT
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_4447_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9191..9610
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF1_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_4447_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9607..11532
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF0_GEMAT
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91513.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
type II and III secretion system protein
13_1_40cm_3_scaffold_4447_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11563..14088
DNA (2526bp) protein (842aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_4447_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14208..15386
DNA (1179bp) protein (393aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT rbh
13_1_40cm_3_scaffold_4447_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15383..15901
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT
13_1_40cm_3_scaffold_4447_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16007..18187
DNA (2181bp) protein (727aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
Displaying 18 items

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