ggKbase home page

13_1_40cm_3_scaffold_5574

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5574_1
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..358
DNA (357bp) protein (119aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035EAA9A
glycine cleavage T protein (aminomethyl transferase)
13_1_40cm_3_scaffold_5574_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

358..2142
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003662359
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_5574_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2219..3313
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363C3DF
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_5574_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

3317..4372
DNA (1056bp) protein (352aa)
Gll3435 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFT9_GLOVI
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
13_1_40cm_3_scaffold_5574_5
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4369..5739
DNA (1371bp) protein (457aa)
Tyrosine decarboxylase (EC:4.1.1.25)
Tyrosine decarboxylase {ECO:0000313|EMBL:AFZ60767.1}; EC=4.1.1.25 {ECO:0000313|EMBL:AFZ60767.1};; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena c
Tyrosine decarboxylase n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZQF9_ANACC rbh
13_1_40cm_3_scaffold_5574_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5736..7892)
DNA (2157bp) protein (719aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q7_GEMAT
TonB-dependent outer membrane transport protein
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH38267.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_1_40cm_3_scaffold_5574_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7923..9107
DNA (1185bp) protein (395aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
conserved hypothetical protein
13_1_40cm_3_scaffold_5574_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(9099..10523)
DNA (1425bp) protein (475aa)
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
gatA2; amidase
13_1_40cm_3_scaffold_5574_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10732..12027
DNA (1296bp) protein (432aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_3_scaffold_5574_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11996..12331
DNA (336bp) protein (112aa)
diguanylate cyclase Tax=RBG_16_Gemmatimonadetes_66_8_curated
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
13_1_40cm_3_scaffold_5574_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12336..12965)
DNA (630bp) protein (210aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Displaying 11 items

View Taxonomy