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13_1_40cm_3_scaffold_1510

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1510_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..2621)
DNA (2619bp) protein (873aa)
Outer membrane receptor protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANQ3_IGNAJ
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Outer membrane receptor protein
13_1_40cm_3_scaffold_1510_2
unknown

Not on your lists

comp(2618..3691)
DNA (1074bp) protein (358aa)

This feature has no annotations

13_1_40cm_3_scaffold_1510_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3714..5999
DNA (2286bp) protein (762aa)
Glycosyl transferase family 51 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J779_ANAD2 rbh
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:AHG93765.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1510_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6050..8005
DNA (1956bp) protein (652aa)
Peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIK6_RHOMR
peptidase
Peptidase {ECO:0000313|EMBL:AHG89716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1510_5
unknown

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comp(8047..8481)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_3_scaffold_1510_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8478..8825)
DNA (348bp) protein (116aa)
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIV7_KORVE
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_3_scaffold_1510_7
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(8828..10483)
DNA (1656bp) protein (552aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=16995614 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
peptidase S9 prolyl oligopeptidase
13_1_40cm_3_scaffold_1510_8
unknown

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comp(10483..10740)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_1510_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10805..11800
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJV3_ANASK
13_1_40cm_3_scaffold_1510_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11865..12131
DNA (267bp) protein (89aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1510_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(12128..13051)
DNA (924bp) protein (308aa)
metal dependent phosphohydrolase Tax=RBG_16_Zixibacteria_43_9_curated
Metal dependent phosphohydrolase id=4306246 bin=GWF2_Syntrophobacterales_56_9 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
HDIG domain-containing protein
13_1_40cm_3_scaffold_1510_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13287..13724
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Arthrospira platensis C1 RepID=K1WAS7_ARTPT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_1510_13
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

14041..15381
DNA (1341bp) protein (447aa)
Uncharacterized protein (Fragment) n=1 Tax=Ficedula albicollis RepID=U3KKI1_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000015535}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurisc
OmpA family protein
13_1_40cm_3_scaffold_1510_14
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

15378..16439
DNA (1062bp) protein (354aa)
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein id=24428421 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PBS lyase HEAT domain-containing protein repeat-containing protein
13_1_40cm_3_scaffold_1510_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16436..17845
DNA (1410bp) protein (470aa)
Glycosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP36_BLASD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:CCG02697.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain D
13_1_40cm_3_scaffold_1510_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17931..19619
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZQQ6_THETH
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1510_17
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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19789..20283
DNA (495bp) protein (165aa)
cytoplasmic protein id=15193062 bin=GWC2_NOV_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
cytoplasmic protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
hypothetical protein
13_1_40cm_3_scaffold_1510_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20283..21767
DNA (1485bp) protein (495aa)
Tetratricopeptide TPR_2 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methyltransferase type 11 id=3354359 bin=GWA2_Elusimicrobia_66_18 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Sulfotransferase
13_1_40cm_3_scaffold_1510_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21776..22453)
DNA (678bp) protein (226aa)
hypothetical protein
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Hypothetical membrane protein id=3719104 bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_1510_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22741..23979)
DNA (1239bp) protein (413aa)
Membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative dipeptidase (EC:3.4.13.-)
Putative dipeptidase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YR30_9CAUL
13_1_40cm_3_scaffold_1510_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24054..24575
DNA (522bp) protein (174aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferredoxin:(2Fe-2S)-binding protein
13_1_40cm_3_scaffold_1510_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24562..26097
DNA (1536bp) protein (512aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_1510_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26103..26960
DNA (858bp) protein (286aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=14627888 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_1510_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26960..27940
DNA (981bp) protein (327aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_3_scaffold_1510_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27955..28491)
DNA (537bp) protein (179aa)
Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM9_RUBXD
PadR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional regulator PadR family protein
13_1_40cm_3_scaffold_1510_26
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28646..29320
DNA (675bp) protein (225aa)
TENA/THI-4 family n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CGP1_ALCDB
TENA/THI-4 family
TENA/THI-4 family {ECO:0000313|EMBL:AFT70892.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei
13_1_40cm_3_scaffold_1510_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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29317..31230
DNA (1914bp) protein (638aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHA2_9CHLR
13_1_40cm_3_scaffold_1510_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(31308..32801)
DNA (1494bp) protein (498aa)
serine protease (EC:3.4.21.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003623659
htrA; putative serine protease HtrA Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1510_29
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(32798..33337)
DNA (540bp) protein (180aa)
RNA polymerase subunit sigma-24 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B76E06
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_3_scaffold_1510_30
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

33533..34651
DNA (1119bp) protein (373aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
hypothetical protein
Displaying items 1-30 of 36 in total

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