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13_1_40cm_3_scaffold_2091

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2091_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..1504
DNA (1503bp) protein (501aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
13_1_40cm_3_scaffold_2091_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1501..2100
DNA (600bp) protein (200aa)
TonB family protein
TonB-like Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2091_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2069..3475
DNA (1407bp) protein (469aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_3_scaffold_2091_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3475..4353
DNA (879bp) protein (293aa)
D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL0_GEMAT
13_1_40cm_3_scaffold_2091_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4452..5276
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035CE521
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidase S54, rhomboid domain protein
13_1_40cm_3_scaffold_2091_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5281..7245
DNA (1965bp) protein (655aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_2091_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7302..8246
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_2091_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8243..8452
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2091_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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8449..8946
DNA (498bp) protein (166aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase
13_1_40cm_3_scaffold_2091_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8962..10296)
DNA (1335bp) protein (445aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_40cm_3_scaffold_2091_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10319..11989)
DNA (1671bp) protein (557aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_40cm_3_scaffold_2091_12
unknown

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12363..12599
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_2091_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12596..12757)
DNA (162bp) protein (54aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L34
13_1_40cm_3_scaffold_2091_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12883..14121
DNA (1239bp) protein (413aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Chromosomal replication initiator protein dnaA
13_1_40cm_3_scaffold_2091_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14456..15562
DNA (1107bp) protein (369aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT rbh
DNA polymerase III, beta subunit
13_1_40cm_3_scaffold_2091_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15546..16340)
DNA (795bp) protein (265aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QL57_CHLP8
monofunctional biosynthetic peptidoglycan transglycosylase
13_1_40cm_3_scaffold_2091_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16468..17916
DNA (1449bp) protein (483aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_40cm_3_scaffold_2091_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(17923..18672)
DNA (750bp) protein (250aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 18 items

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