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13_1_40cm_3_scaffold_3170

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3170_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
PHP domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2N1_9BACT
DNA polymerase X family protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphotransferase domain-containing protein
13_1_40cm_3_scaffold_3170_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(252..1082)
DNA (831bp) protein (277aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AHG89982.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3170_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1088..1546)
DNA (459bp) protein (153aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
13_1_40cm_3_scaffold_3170_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1637..3238
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3170_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3241..4311)
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS rbh
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_3_scaffold_3170_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4308..5333)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHG3_SORC5
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_3170_7
R_WOR_2_68_15, WOR-2, Bacteria

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comp(5356..5985)
DNA (630bp) protein (210aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
periplasmic binding protein
13_1_40cm_3_scaffold_3170_8
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(6196..8370)
DNA (2175bp) protein (725aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAK9_SINAD
oligopeptide transporter Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
oligopeptide transporter
13_1_40cm_3_scaffold_3170_9
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8521..8853)
DNA (333bp) protein (111aa)
Transposase IS200-family protein {ECO:0000313|EMBL:AFZ13021.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 93
13_1_40cm_3_scaffold_3170_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8979..10601
DNA (1623bp) protein (541aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_3_scaffold_3170_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10691..14005
DNA (3315bp) protein (1105aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD2_GEMAT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88125.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3170_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14024..14218)
DNA (195bp) protein (65aa)
methionine aminotransferase, plp-dependent (EC:2.6.1.-); K14287 methionine aminotransferase [EC:2.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aminotransferase class I and II
Kynurenine--oxoglutarate transaminase id=4489877 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 12 items

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