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13_1_40cm_3_scaffold_325

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_325_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..297)
DNA (297bp) protein (99aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" so
Glycerol kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K0_GEMAT
13_1_40cm_3_scaffold_325_2
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(294..752)
DNA (459bp) protein (153aa)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=MTNA_PELTS
translation initiation factor 2B subunit
13_1_40cm_3_scaffold_325_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1371..2153
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Short chain enoyl-CoA hydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T70_SOLUE
Enoyl-CoA hydratase/isomerase
13_1_40cm_3_scaffold_325_4
unknown

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2255..2509
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_325_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2569..2880
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF721
13_1_40cm_3_scaffold_325_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2896..4848
DNA (1953bp) protein (651aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
DNA gyrase B subunit
13_1_40cm_3_scaffold_325_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5243..7093
DNA (1851bp) protein (617aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00036A0FB1
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_325_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7097..8473)
DNA (1377bp) protein (459aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_1_40cm_3_scaffold_325_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8504..9289
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_325_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9378..10163
DNA (786bp) protein (262aa)
Sensor histidine kinase/response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFM5_MYXSD
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_40cm_3_scaffold_325_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10160..12187
DNA (2028bp) protein (676aa)
ligA; NAD(+)-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DNLJ_GEMAT
DNA ligase
13_1_40cm_3_scaffold_325_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12201..12749
DNA (549bp) protein (183aa)
bchJ; bacteriochlorophyll 4-vinyl reductase; K07013 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_325_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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12746..13255
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RET7_STRVP
acetyltransferase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
GCN5-related N-acetyltransferase
13_1_40cm_3_scaffold_325_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13270..14592)
DNA (1323bp) protein (441aa)
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase U62, modulator of DNA gyrase id=4827012 bin=GWC2_Chloroflexi_49_37 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
peptidase U62 modulator of DNA gyrase
13_1_40cm_3_scaffold_325_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(14589..15974)
DNA (1386bp) protein (462aa)
Peptidase id=2037494 bin=GWB2_Chloroflexi_49_20 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWC2_Chloroflexi_49_37_curated
peptidase U62 modulator of DNA gyrase
13_1_40cm_3_scaffold_325_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15971..16522)
DNA (552bp) protein (184aa)
Purine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H0_GEMAT
purine phosphoribosyltransferase; K07101 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosyltransferase
13_1_40cm_3_scaffold_325_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16539..17036
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tetratricopeptide TPR_2 repeat-containing protein
13_1_40cm_3_scaffold_325_18
unknown

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17108..17737
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_3_scaffold_325_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17734..19554
DNA (1821bp) protein (607aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
AMP-dependent synthetase and ligase
fadD; Long-chain acyl-CoA synthetase id=17278959 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_325_20
unknown

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comp(19598..19693)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 20 items

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