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13_1_40cm_3_scaffold_3869

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3869_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..1757
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Heparinase II/III family protein
13_1_40cm_3_scaffold_3869_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1754..2503
DNA (750bp) protein (250aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_1_40cm_3_scaffold_3869_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2460..3629
DNA (1170bp) protein (390aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
aminotransferase class-III
13_1_40cm_3_scaffold_3869_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3692..5221
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase 2
13_1_40cm_3_scaffold_3869_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6052..7176
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_3869_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7157..8284
DNA (1128bp) protein (376aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_1_40cm_3_scaffold_3869_7
unknown

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comp(8268..8474)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_3_scaffold_3869_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8836..9333
DNA (498bp) protein (166aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELD1_RUNSL
glycoside hydrolase
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:AEI51900.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" s
13_1_40cm_3_scaffold_3869_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9273..11333
DNA (2061bp) protein (687aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELD1_RUNSL
glycoside hydrolase
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:AEI51900.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" s
13_1_40cm_3_scaffold_3869_10
unknown

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11364..11528
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_3869_11
unknown

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11572..12042
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_3_scaffold_3869_12
unknown

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comp(11893..12186)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_3_scaffold_3869_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12206..12742
DNA (537bp) protein (179aa)
cytochrome c3 (EC:1.7.2.2) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit id=1871251 bin=GWB2_Proteobacteria_55_19 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
13_1_40cm_3_scaffold_3869_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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12761..15760
DNA (3000bp) protein (1000aa)
mopA; protein MopA (EC:1.2.7.-); K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14426357 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
mopA; protein MopA (EC:1.2.7.-); K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_2_Dadabacteria
putative oxidoreductase
13_1_40cm_3_scaffold_3869_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15763..16701
DNA (939bp) protein (313aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
polysulfide reductase NrfD
Displaying 15 items

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