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13_1_40cm_3_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_568_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14429960 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ABC-3 protein
13_1_40cm_3_scaffold_568_2
unknown

Not on your lists

397..1017
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_40cm_3_scaffold_568_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1014..1643
DNA (630bp) protein (210aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_568_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1772..4042
DNA (2271bp) protein (757aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XW7_SOLUE rbh
phosphate acetyl/butaryl transferase
13_1_40cm_3_scaffold_568_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4058..5683
DNA (1626bp) protein (542aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N1_GEMAT
Phosphoenolpyruvate carboxykinase [ATP]
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_40cm_3_scaffold_568_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5680..6939
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N5_GEMAT rbh
hypothetical protein; K06885 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal-dependent phosphohydrolase HD sub domain-containing protein
13_1_40cm_3_scaffold_568_7
unknown

Not on your lists

7006..7350
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_3_scaffold_568_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

7347..8507
DNA (1161bp) protein (387aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Probable lipoprotein id=4178914 bin=GWA2_Ignavibacteria_55_11 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_3_scaffold_568_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8527..9240)
DNA (714bp) protein (238aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N8_GEMAT
protein phosphatase 2C domain protein
13_1_40cm_3_scaffold_568_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9318..10649)
DNA (1332bp) protein (444aa)
Conserved transmembrane ATP-binding protein ABC transporter subunit n=1 Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QVG5_9MYCO
FHA domain-containing protein; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Conserved transmembrane ATP-binding protein ABC transporter subunit
13_1_40cm_3_scaffold_568_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10724..11794)
DNA (1071bp) protein (357aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8R7_SORC5
hypothetical protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_568_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11890..14676
DNA (2787bp) protein (929aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
excinuclease ABC, A subunit
13_1_40cm_3_scaffold_568_13
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

14673..15515
DNA (843bp) protein (281aa)
hypothetical protein id=7202063 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein
13_1_40cm_3_scaffold_568_trna_1
unknown

Not on your lists

15529..15601
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_568_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15544..18822
DNA (3279bp) protein (1093aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase
13_1_40cm_3_scaffold_568_15
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

18834..20816
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00037D11A7 rbh
sensory box sensor histidine kinase Tax=CG_Arma_02
multi-sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_568_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20813..21511
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ4_9BACT
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:AKF04220.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinu
two component transcriptional regulator, LuxR family
13_1_40cm_3_scaffold_568_17
Gadus morhua, Gadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(21569..22426)
DNA (858bp) protein (286aa)
Antifreeze glycoprotein n=1 Tax=Gadus morhua RepID=H2KMI5_GADMO
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09567.1}; TaxID=8049 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acant
13_1_40cm_3_scaffold_568_18
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(22653..22964)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=GWC2_Nitrospirae_57_9_curated
13_1_40cm_3_scaffold_568_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23083..23949
DNA (867bp) protein (289aa)
Multi-sensor hybrid histidine kinase id=3644888 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AHG90499.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_568_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24107..25114
DNA (1008bp) protein (336aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
13_1_40cm_3_scaffold_568_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25114..25602
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DB5CE
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdenum cofactor biosynthesis C, bacterial-type
13_1_40cm_3_scaffold_568_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25664..26308
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_568_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26374..27936)
DNA (1563bp) protein (521aa)
transglycosylase, slt family; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lytic transglycosylase, catalytic id=3894255 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
putative transglycosylase
13_1_40cm_3_scaffold_568_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27933..28358)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_568_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28369..28617)
DNA (249bp) protein (83aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_568_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28614..28865)
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_568_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28957..29817)
DNA (861bp) protein (287aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWC2_Gemmatimonadetes_71_10_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4P6_9BACT rbh
13_1_40cm_3_scaffold_568_trna_2
unknown

Not on your lists

comp(29943..30015)
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_568_28
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30070..30924
DNA (855bp) protein (285aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2514
methyltransferase
Displaying items 1-30 of 31 in total

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