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13_1_40cm_3_scaffold_6991

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6991_1
unknown

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comp(1..225)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_3_scaffold_6991_2
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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262..732
DNA (471bp) protein (157aa)
TIGR01244 family protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VNK8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP46484.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
13_1_40cm_3_scaffold_6991_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(852..1238)
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_6991_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1314..1649
DNA (336bp) protein (112aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_6991_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1651..3009
DNA (1359bp) protein (453aa)
resA; thiol-disulfide oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiol-disulfide oxidoreductase resA id=4736526 bin=GWC2_Nitrospirae_57_13 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_40cm_3_scaffold_6991_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3020..3982
DNA (963bp) protein (321aa)
Inosine/uridine-preferring nucleoside hydrolase n=2 Tax=Chloroflexus RepID=A9WE72_CHLAA
nucleoside hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
inosine/uridine-preferring nucleoside hydrolase
13_1_40cm_3_scaffold_6991_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3979..4932
DNA (954bp) protein (318aa)
Putative hydroxlacyl-CoA dehydrogenase n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U0W1_BORBO
hydroxlacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydroxlacyl-CoA dehydrogenase
13_1_40cm_3_scaffold_6991_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4929..5357)
DNA (429bp) protein (143aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_6991_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5361..5858)
DNA (498bp) protein (166aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_1_40cm_3_scaffold_6991_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5875..6672)
DNA (798bp) protein (266aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_1_40cm_3_scaffold_6991_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6653..7213)
DNA (561bp) protein (187aa)
transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B46EAC
DtxR family transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron dependent repressor
13_1_40cm_3_scaffold_6991_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7519..8049)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_6991_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8105..8800)
DNA (696bp) protein (232aa)
High-affinity nickel-transporter protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F2_GEMAT
high-affinity nickel-transporter protein
High-affinity nickel-transporter protein {ECO:0000313|EMBL:BAH37462.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aura
13_1_40cm_3_scaffold_6991_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8897..9460
DNA (564bp) protein (188aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_6991_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9484..10140
DNA (657bp) protein (219aa)
Putative transmembrane anti-sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_6991_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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10152..11060
DNA (909bp) protein (303aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=17356698 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_6991_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11035..11826
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF4098
13_1_40cm_3_scaffold_6991_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11891..14911
DNA (3021bp) protein (1007aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_6991_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14853..16823
DNA (1971bp) protein (657aa)
Putative helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG5_GEMAT
putative helicase Tax=RBG_16_Actinobacteria_67_10_curated
putative helicase
Displaying 19 items

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