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13_1_40cm_3_scaffold_903

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_903_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..472
DNA (471bp) protein (157aa)
phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=GWC2_Gemmatimonadetes_71_10_curated
pstB; phosphate ABC transporter, ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNN9_9RHOB
13_1_40cm_3_scaffold_903_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

469..1167
DNA (699bp) protein (233aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB06_GEMAT
phoU; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phoU; phosphate transport system regulatory protein PhoU
13_1_40cm_3_scaffold_903_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1181..1570
DNA (390bp) protein (130aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Protein tyrosine phosphatase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGH6_ANADF
protein tyrosine phosphatase
13_1_40cm_3_scaffold_903_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1561..2313)
DNA (753bp) protein (251aa)
rhomboid family protein id=12557265 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rhomboid family protein
13_1_40cm_3_scaffold_903_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2454..4343
DNA (1890bp) protein (630aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperone protein dnaK
13_1_40cm_3_scaffold_903_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4369..5943
DNA (1575bp) protein (525aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PDZ/DHR/GLGF domain protein
13_1_40cm_3_scaffold_903_7
unknown

Not on your lists

comp(6029..6688)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_3_scaffold_903_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6724..7230
DNA (507bp) protein (169aa)
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_3_scaffold_903_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7190..7996)
DNA (807bp) protein (269aa)
ctaG; putative CtaG protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
hypothetical protein; K02862 putative membrane protein id=14625151 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_3_scaffold_903_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7993..8301)
DNA (309bp) protein (103aa)
hypothetical protein id=24489208 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
cytochrome C oxidase subunit IV
13_1_40cm_3_scaffold_903_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8316..8678)
DNA (363bp) protein (121aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1); K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] Tax=GWC2_Rokubacteria_70_16_curated
Cytochrome c oxidase subunit III id=4743811 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome c oxidase subunit III
13_1_40cm_3_scaffold_903_12
unknown

Not on your lists

8680..8778
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_3_scaffold_903_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8871..9842)
DNA (972bp) protein (324aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RBG_16_RIF_WS3X_71_46_curated
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=24489206 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1)
13_1_40cm_3_scaffold_903_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9980..10201
DNA (222bp) protein (74aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_903_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10602..11051)
DNA (450bp) protein (150aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=14625147 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=CSP1_6_Rokubacteria
cytochrome C oxidase subunit II
13_1_40cm_3_scaffold_903_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11648..12592
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y971_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41439.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_903_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12596..13447)
DNA (852bp) protein (284aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
xylose isomerase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
xylose isomerase domain-containing protein
13_1_40cm_3_scaffold_903_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13450..15132)
DNA (1683bp) protein (561aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG4_RHOM4
glucose-methanol-choline oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glucose-methanol-choline oxidoreductase
13_1_40cm_3_scaffold_903_19
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15136..15711)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIR5_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL89133.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
13_1_40cm_3_scaffold_903_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15817..17100
DNA (1284bp) protein (428aa)
Serine/threonine protein kinase with TPR repeats n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP04_KORVE
serine/threonin protein kinase
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_903_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17131..19125
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003637B4F rbh
Glycoside hydrolase, family 20, catalytic core
Glycoside hydrolase, family 20, catalytic core {ECO:0000313|EMBL:AHG90566.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_903_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19122..20381)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A2703
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87974.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_3_scaffold_903_23

Not on your lists

comp(20409..21371)
DNA (963bp) protein (321aa)
Sugar phosphate isomerase/epimerase n=1 Tax=mine drainage metagenome RepID=E6QL90_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48722.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sugar phosphate isomerase/epimerase
13_1_40cm_3_scaffold_903_24

Not on your lists

comp(21382..22590)
DNA (1209bp) protein (403aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_903_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22587..23381)
DNA (795bp) protein (265aa)
myo-inositol catabolism protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000363AC91
iolB; Myo-inositol catabolism IolB domain-containing protein
13_1_40cm_3_scaffold_903_26
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(23385..24323)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000364A9F1
hexuronate transporter; K08191 MFS transporter, ACS family, hexuronate transporter Tax=RBG_13_Acidobacteria_68_16_curated
hexuronate transporter
13_1_40cm_3_scaffold_903_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(24603..25136)
DNA (534bp) protein (178aa)
gno; gluconate 5-dehydrogenase (EC:1.1.1.69)
Gluconate 5-dehydrogenase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F499_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:CDM66675.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Displaying 27 items

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