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13_1_40cm_3_scaffold_3484_11

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 9904..10656

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 23.1
  • Coverage: 247.0
  • Bit_score: 72
  • Evalue 5.00e-10
AraC family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 243.0
  • Bit_score: 219
  • Evalue 4.70e-54
Helix-turn-helix, AraC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 244.0
  • Bit_score: 82
  • Evalue 1.80e-13

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 753
ATGCTGGTTCTAGCCGCTGTCCCAGAAGTGCAACTGCAACGGCTGCGTCGCGCGGCCGGGGTACGTTTCACGTTCGTGCGCGCCGCGAGTTGGGACGAAGTGCTGGCGGGCATCCGCGCGCGGCCCGTCGAGCTCGCGGTGCTGGACCCCACGCTCGGCGGCGAGGCGCGCGCCCAGGAGCTCGAACGCCTNNNNNNNNNNNNNNNNNNNNNNCTCGCGCTCGGCAAGCACGGCATCCGCCACGTGATCTTCGTGCGCTACGACGATCACCCCGAGCGGTTGCGCGAGGTGCTGGAGCGCGAGGCCAGCGGCGCCGCCTCCCGCCGCCTCCTCGACCAGCTCGCGGACCGGCTGAGCCCGCTGCCCACCGAGCTGCGCTGGGTGCTCGAGGAAGCGTTGCGCACCCCCGAAGAGGTCCAGACGGTAGGCCGCCTGGCGGCGCGGGCGCGCGTGGACCGGCGCACCTGCGAGCGCTGGTTCACGCGCGTCGGCCTGCCGACCCCGCGGCATTTCCTCGCGGCCGCCCGCGTGCTGTACGCCCATCGGCTGTTGCAGGACCCCGGCTTCACGATCGAGGACGTGGCGGTCCGATTGGGCTACGCCCAGGTGAAGACGTTGCAGCAGCACGCCCGCACCTACCTCGGCTTGACCGCCGGCGAGATGCGTCTGTCGCTGAGTCCTGACGAGGCCCTCGATCTCGTGGTGCGTCGGTTCCGGCAGCCCGCCGCCGTCGCCACGATCGCGGTCTCATGA
PROTEIN sequence
Length: 251
MLVLAAVPEVQLQRLRRAAGVRFTFVRAASWDEVLAGIRARPVELAVLDPTLGGEARAQELERXXXXXXXXLALGKHGIRHVIFVRYDDHPERLREVLEREASGAASRRLLDQLADRLSPLPTELRWVLEEALRTPEEVQTVGRLAARARVDRRTCERWFTRVGLPTPRHFLAAARVLYAHRLLQDPGFTIEDVAVRLGYAQVKTLQQHARTYLGLTAGEMRLSLSPDEALDLVVRRFRQPAAVATIAVS*