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13_1_40cm_3_scaffold_3484

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3484_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..916)
DNA (915bp) protein (305aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4381729 bin=GWA2_Elusimicrobia_66_18 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_3_scaffold_3484_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(903..1319)
DNA (417bp) protein (139aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3484_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1488..2813)
DNA (1326bp) protein (442aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT rbh
glutamine synthetase, type I
13_1_40cm_3_scaffold_3484_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2936..4405)
DNA (1470bp) protein (490aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Glutamine synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBY2_THET1
glutamine synthetase, type I
13_1_40cm_3_scaffold_3484_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4670..4933)
DNA (264bp) protein (88aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3484_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4989..5666
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_40cm_3_scaffold_3484_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5663..6517
DNA (855bp) protein (285aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD
periplasmic solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF178
13_1_40cm_3_scaffold_3484_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6675..7586
DNA (912bp) protein (304aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_1_40cm_3_scaffold_3484_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7752..8183)
DNA (432bp) protein (144aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3484_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8388..9641
DNA (1254bp) protein (418aa)
SARP family transcriptional regulator n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPI3_9ACTO
SARP family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3484_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9904..10656
DNA (753bp) protein (251aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
AraC family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
Helix-turn-helix, AraC domain-containing protein
13_1_40cm_3_scaffold_3484_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10653..11021
DNA (369bp) protein (123aa)
Sensor histidine kinase/response regulator n=1 Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZXZ4_DEHSC
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_40cm_3_scaffold_3484_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11025..11663
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_3484_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11717..12337
DNA (621bp) protein (207aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
13_1_40cm_3_scaffold_3484_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12342..14720
DNA (2379bp) protein (793aa)
acyltransferase; K00631 glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycerol-3-phosphate O-acyltransferase id=4722237 bin=GWC2_Deltaproteobacteria_66_88 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
Acyltransferase family protein associated with ethylmalonyl-CoA pathway
13_1_40cm_3_scaffold_3484_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14784..15776
DNA (993bp) protein (331aa)
HD-superfamily hydrolase; K03698 CMP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
metal dependent phosphohydrolase
Metal dependent phosphohydrolase id=4774439 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_3484_17
unknown

Not on your lists

comp(15742..15942)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_3484_18
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16008..16397
DNA (390bp) protein (130aa)
Hypothetical cytosolic protein id=4481933 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein Tax=RBG_16_Deltaproteobacteria_58_17_curated
cytoplasmic protein
13_1_40cm_3_scaffold_3484_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16397..17842
DNA (1446bp) protein (482aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA-splicing ligase RtcB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L0_PELCD
tRNA-splicing ligase
13_1_40cm_3_scaffold_3484_20
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17844..18782)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans str. Evry RepID=B0VIN9_CLOAI id=1246962 bin=RBG9 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
13_1_40cm_3_scaffold_3484_21
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18779..19477)
DNA (699bp) protein (233aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJW8_ANASK
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACG72677.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
13_1_40cm_3_scaffold_3484_22
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19482..20528)
DNA (1047bp) protein (349aa)
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:ABC82188.1}; EC=2.4.1.57 {ECO:0000313|EMBL:ABC82188.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococca
Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKK6_ANADE
13_1_40cm_3_scaffold_3484_23
unknown

Not on your lists

comp(21215..21721)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_3_scaffold_3484_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21721..22341)
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_3484_25
unknown

Not on your lists

22388..22945
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_3_scaffold_3484_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22964..24940)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_3484_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24950..26947)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_3484_28
unknown

Not on your lists

27517..28053
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_3_scaffold_3484_29
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28058..28993)
DNA (936bp) protein (312aa)
ADP-ribosyl-(Dinitrogen reductase) hydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8P0_9EURY
ADP-ribosyl-(Dinitrogen reductase) hydrolase {ECO:0000313|EMBL:EMA66223.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
ADP-ribosylglycohydrolase
13_1_40cm_3_scaffold_3484_30
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29025..29882
DNA (858bp) protein (286aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SBJ0_9CYAN
alpha/beta fold family hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFY67997.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 74
Displaying items 1-30 of 38 in total

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