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13_1_40cm_3_scaffold_4803_5

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(5960..6520)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor id=3870044 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 158.0
  • Bit_score: 111
  • Evalue 9.50e-22
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 158.0
  • Bit_score: 111
  • Evalue 1.30e-21
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 153.0
  • Bit_score: 106
  • Evalue 1.10e-20

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Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCGGAGCCGTCACTCCGGTCCCTCCCATCGGCCCCTCTCCTCGGGGCCCTGTGCGCGCGTCCCTCACAGTGGGAAGCGGCGTTCGCCGCGCACTACGGTGCGCTGTGCGAGTACGTGCTGCGGTTCGTCGGATCGGCGGAAACGGCCGAAGACGTCGTGCAGGACCTGTTCCTCCATCTCTGGGATACGCGCGGCCCCCGGGACGCGCTCCGCTTGACGCGCCGGTATCTGTACGTCGCGGCGCGCAACCGCGCACTGAAATACCTGCGCCACCGTCGCGTCGCGGATGGGTGGCTCGAGCGCGTGAACCGCGACCCCACGCCACGCTTGGAGACCCCGGAAGATGTCTGCCTGCGCCGCGAGCTGGACGCCGCCGTGCAGCGCGCCATCGCCGAGCTGCCGGAGCGCTGTCGCGCCACGTTCCTGTTGAGACGGCGCGAGGGGCTGAGCTACGAGGCGATTGCCGCGCGCCGCGGGGTGTCGCTGGGCACCGTCAAGTCCCAGATGTGGCGGGCCGCGGTGCTCCTCAGGTCCAAGCTCGCCGCGTTCATACTCTGA
PROTEIN sequence
Length: 187
MSEPSLRSLPSAPLLGALCARPSQWEAAFAAHYGALCEYVLRFVGSAETAEDVVQDLFLHLWDTRGPRDALRLTRRYLYVAARNRALKYLRHRRVADGWLERVNRDPTPRLETPEDVCLRRELDAAVQRAIAELPERCRATFLLRRREGLSYEAIAARRGVSLGTVKSQMWRAAVLLRSKLAAFIL*