ggKbase home page

13_2_20cm_scaffold_1570_11

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 8297..8611

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 169
  • Evalue 2.20e-39
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 190
  • Evalue 1.70e-45
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 2.70e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 315
ATGACGAAGGCGGACCTGGTCGAGAAGGTCACTGCACAAATTGCCCGCACTGCCGGTCCCCTGATTTCCAAAAAGGACTGCGCGCGCGTCGTCGACTCGTTCCTCGACGCGGTGAAGGCCGCGCTGGCCGAGCAGCATAACATTGAGATACGTGGCTTTGGGACATTCAAGATCCGGCAGCGTAAGACCCGGATGGCGCGCAACCCGCGCACCGGCGACCCGGTGGAAGTCGCGGCGCGCCCGGTCCCTGTGTTCAAGCCCAGCAAGGAGTTGCGAGCCATGGTGGCGGAAGCGAGCGAGAAGGTCACGCCCTGA
PROTEIN sequence
Length: 105
MTKADLVEKVTAQIARTAGPLISKKDCARVVDSFLDAVKAALAEQHNIEIRGFGTFKIRQRKTRMARNPRTGDPVEVAARPVPVFKPSKELRAMVAEASEKVTP*