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13_2_20cm_scaffold_1570

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1570_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..457
DNA (456bp) protein (152aa)
DNA repair protein radA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadA
13_2_20cm_scaffold_1570_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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420..1136
DNA (717bp) protein (239aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
13_2_20cm_scaffold_1570_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1133..1792
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sua5/YciO/YrdC/YwlC family protein
13_2_20cm_scaffold_1570_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1792..2286
DNA (495bp) protein (165aa)
protein-tyrosine-phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-tyrosine-phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
13_2_20cm_scaffold_1570_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2270..3091
DNA (822bp) protein (274aa)
Shikimate dehydrogenase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIU5_9CHRO
aroE; shikimate 5-dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Shikimate dehydrogenase
13_2_20cm_scaffold_1570_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3811..4818
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bact
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A911_GEMAT
glyceraldehyde-3-phosphate dehydrogenase, type I
13_2_20cm_scaffold_1570_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4815..5993
DNA (1179bp) protein (393aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoglycerate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT
Phosphoglycerate kinase
13_2_20cm_scaffold_1570_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5990..6742
DNA (753bp) protein (251aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Triosephosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A909_GEMAT
Triosephosphate isomerase, bacterial/eukaryotic
13_2_20cm_scaffold_1570_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6762..7142
DNA (381bp) protein (127aa)
Protein-export membrane protein SecG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A908_GEMAT
secG; protein-export membrane protein SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
secG; protein-export membrane protein SecG
13_2_20cm_scaffold_1570_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7159..8238
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
13_2_20cm_scaffold_1570_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8297..8611
DNA (315bp) protein (105aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_2_20cm_scaffold_1570_12
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8711..10495
DNA (1785bp) protein (595aa)
Peptidase M61 domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U630_9CYAN
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:AFY90255.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_2_20cm_scaffold_1570_13
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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10519..10782
DNA (264bp) protein (88aa)
Molybdopterin synthase sulfur carrier subunit n=2 Tax=Zea mays RepID=MOC2A_MAIZE
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
thiamine S protein
13_2_20cm_scaffold_1570_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10839..11279
DNA (441bp) protein (147aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdopterin biosynthesis MoaE protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB6_RHOMR
molybdopterin biosynthesis MoaE protein
13_2_20cm_scaffold_1570_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11272..12309
DNA (1038bp) protein (346aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdenum cofactor biosynthesis protein A id=2653035 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaA; molybdenum cofactor biosynthesis protein A
13_2_20cm_scaffold_1570_16
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12339..12968)
DNA (630bp) protein (210aa)
Kelch repeat protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I4E2_CLOCE
NHL repeat containing protein Tax=GWD2_Elusimicrobia_63_28_curated
Kelch repeat-containing protein
13_2_20cm_scaffold_1570_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13616..14068
DNA (453bp) protein (151aa)
malate dehydrogenase, NAD-dependent; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase id=3859633 bin=GWF2_Methylomirabilis_70_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 17 items

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