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13_2_20cm_scaffold_2485_3

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 1410..1970

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 186.0
  • Bit_score: 265
  • Evalue 3.00e-68
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 272
  • Evalue 4.50e-70
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 186.0
  • Bit_score: 267
  • Evalue 3.80e-69

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGGTGGCGTGGGCCAAGCAGGGGCACGAGGCGGCGTTCCGCGAGCTGGTACGCCGCTACGAGCGGCCCCTGTTCTCATTGCTCTATCGCATGGTGCGCGACCGGGCGCTCGCCGAAGACCTGGCGCAGGAAACGTTCATCAAGGTCTTGAACGGGATCGGGTCGTACAATCCACAGTTCAAGTTCTCGTCGTGGATCTTCAAGATCGCGAACAACGCAGCGATCGATCATCTGCGCAAGCGCGACCTCGACACCCTGTCGCTCGACGGCTCACCCCACGCCACGACGCCGGAAGAGATGCACGCCACCGCCCTGCAACTGGGCGATCGCGGCGAATCGCCCCTGGCGGAGCTGGAGGCGCGCGAGCTGGGCGGCGCCATTGAGCAGGCGATCGCGCGGCTCCGCCCCGAGTACCGGGCCTGTATCCTGCTGCGCCACGTGGAGGGTTTCAGCTACGAGGAAATCGCCGCTACGCTGGAGCTGCCGCTCGGCACCGTGAAGACGTATATCCACCGCGCCCGCAACGAATTGCGGGGCTACCTCGGGGATCGGCGCGAGTGA
PROTEIN sequence
Length: 187
VVAWAKQGHEAAFRELVRRYERPLFSLLYRMVRDRALAEDLAQETFIKVLNGIGSYNPQFKFSSWIFKIANNAAIDHLRKRDLDTLSLDGSPHATTPEEMHATALQLGDRGESPLAELEARELGGAIEQAIARLRPEYRACILLRHVEGFSYEEIAATLELPLGTVKTYIHRARNELRGYLGDRRE*