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13_2_20cm_scaffold_9550_11

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(5478..6029)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 4.30e-35
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 183.0
  • Bit_score: 193
  • Evalue 2.60e-46
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 1.20e-35

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCCCAAGCCGAGCCCGTCGCCGCGGTTCCGACCGATGCGGCGCTGATCGCCGCCTGGCAGGGCGGGGACGAGCAGGCCGCGGCCGAATTGGTCCGCCGGCACGCCCGAGCGCTGGCGCGGTTTCTCTCCGGCGCCGGCGCACTCGAGGCGGATCTCGACGATCTGGTGCAGGAGACGTTCATTCGAGCGTTCCGCGCCGTCGGTCGGTTCCGGGGCCAATGTCGCTTCCGCACCTGGCTCCTGACGATCGGCGGGAACGTGCTGAAGGACGCGGCGCGTCGAGCGAAGCGGTCCCGCGCCGTGCCGCTGGGCGCAGACGTCCGCGCGACCGACGGAGACCCGCACGAGCGCGCCGTGGCGGGCGAAGCGGAGGGGCGCCTCCGGCAAGGGCTCGAGCGCCTGTCGCGGATGCAGCGTGAGGTGTTTCTGCTCCGCGCCCAGCAGGGGCTCGATTATGAGGAGATCGCCGCGGCGTTGGAGACCTCGCCCGGTGCCGCGCGCGTGCATTATCACCACGCCGTCAAACGGCTGAAGGAGTACCTGTCTTGA
PROTEIN sequence
Length: 184
MPQAEPVAAVPTDAALIAAWQGGDEQAAAELVRRHARALARFLSGAGALEADLDDLVQETFIRAFRAVGRFRGQCRFRTWLLTIGGNVLKDAARRAKRSRAVPLGADVRATDGDPHERAVAGEAEGRLRQGLERLSRMQREVFLLRAQQGLDYEEIAAALETSPGAARVHYHHAVKRLKEYLS*