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13_2_20cm_scaffold_9550

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_9550_1
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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1..981
DNA (981bp) protein (327aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
13_2_20cm_scaffold_9550_2
unknown

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995..1111
DNA (117bp) protein (39aa)

This feature has no annotations

13_2_20cm_scaffold_9550_3
unknown

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1108..1488
DNA (381bp) protein (127aa)

This feature has no annotations

13_2_20cm_scaffold_9550_4
unknown

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1492..2046
DNA (555bp) protein (185aa)

This feature has no annotations

13_2_20cm_scaffold_9550_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2079..2531
DNA (453bp) protein (151aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VE1_STIAD
peptidase families s8 and s53 domain-containing protein
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:ADO70877.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigm
13_2_20cm_scaffold_9550_6
unknown

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comp(2553..2912)
DNA (360bp) protein (120aa)

This feature has no annotations

13_2_20cm_scaffold_9550_7
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3010..3417)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q586_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ75175.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="C
13_2_20cm_scaffold_9550_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4037..4483
DNA (447bp) protein (149aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_9550_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4497..5048)
DNA (552bp) protein (184aa)
protein of unknown function Spy-related protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90866.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_9550_10
unknown

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comp(5053..5481)
DNA (429bp) protein (143aa)

This feature has no annotations

13_2_20cm_scaffold_9550_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5478..6029)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_2_20cm_scaffold_9550_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6204..6797
DNA (594bp) protein (198aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TetR-family transcriptional regulator id=1804082 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
13_2_20cm_scaffold_9550_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6804..7619
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
13_2_20cm_scaffold_9550_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7653..8987
DNA (1335bp) protein (445aa)
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
NAD-dependent aldehyde dehydrogenase
13_2_20cm_scaffold_9550_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8984..10168
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
beta-ketoadipyl CoA thiolase (EC:2.3.1.174) id=24418705 bin=RBG_19FT_COMBO_GAL15_69_19 species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acetyl-CoA acetyltransferase (EC:2.3.1.9)
13_2_20cm_scaffold_9550_16
unknown

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comp(10109..10798)
DNA (690bp) protein (230aa)

This feature has no annotations

13_2_20cm_scaffold_9550_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10896..12020
DNA (1125bp) protein (375aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoyl-CoA oxygenase subunit beta
13_2_20cm_scaffold_9550_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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12017..12709
DNA (693bp) protein (231aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_2_20cm_scaffold_9550_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12706..13563
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
13_2_20cm_scaffold_9550_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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13965..14360
DNA (396bp) protein (132aa)
Amidohydrolase 2 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B6Y6_9ZZZZ
amidohydrolase; K07045 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase 2
13_2_20cm_scaffold_9550_21
unknown

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14329..14802
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_scaffold_9550_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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15076..16317
DNA (1242bp) protein (414aa)
Peptidase S16B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN4_GEMAT
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S16B family protein
13_2_20cm_scaffold_9550_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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16356..18431
DNA (2076bp) protein (692aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16 domain protein
13_2_20cm_scaffold_9550_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18448..19839
DNA (1392bp) protein (464aa)
amidohydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5895F rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_9550_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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19836..21044
DNA (1209bp) protein (403aa)
Imidazolonepropionase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCT3_PHEZH rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_9550_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(21081..21344)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UHP8_CYAP2
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L27
13_2_20cm_scaffold_9550_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(21353..21673)
DNA (321bp) protein (107aa)
50S ribosomal protein L21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L21
13_2_20cm_scaffold_9550_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(21708..22484)
DNA (777bp) protein (259aa)
cafA; ribonuclease G (EC:3.1.-.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT
Displaying 28 items

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