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13_1_40cm_scaffold_13944

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_13944_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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3..1922
DNA (1920bp) protein (640aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHC6_9BACT
putative TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative TonB-dependent receptor
13_1_40cm_scaffold_13944_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2065..3837
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM3_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_13944_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3659..4522)
DNA (864bp) protein (288aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-3 protein id=2333732 bin=GWA2_Elusimicrobia_51_34 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
ABC-3 protein
13_1_40cm_scaffold_13944_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4519..5559)
DNA (1041bp) protein (347aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT05_9BACT
troA; periplasmic zinc binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
troA; periplasmic zinc binding protein
13_1_40cm_scaffold_13944_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5561..6805)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_13944_6
unknown

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comp(6875..7210)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_scaffold_13944_7
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7207..7986)
DNA (780bp) protein (260aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R954_AMMDK
13_1_40cm_scaffold_13944_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7986..8618)
DNA (633bp) protein (211aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Desulfobacca_60_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=PIMT_METB6
13_1_40cm_scaffold_13944_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8717..9655
DNA (939bp) protein (313aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
diguanylate cyclase
13_1_40cm_scaffold_13944_10
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9598..10044
DNA (447bp) protein (149aa)
Response regulator/GGDEF domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UE63_MYXSD
response regulator/GGDEF domain-containing protein
Response regulator/GGDEF domain-containing protein {ECO:0000313|EMBL:AGC47206.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; M
13_1_40cm_scaffold_13944_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10041..11270)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_13944_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11267..12124)
DNA (858bp) protein (286aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ftsX; cell division protein FtsX
13_1_40cm_scaffold_13944_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12121..12816)
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M5_GEMAT
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division ATP-binding protein FtsE
Displaying 13 items

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