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13_1_40cm_scaffold_9854

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_9854_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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94..1116
DNA (1023bp) protein (341aa)
Peptidase M28 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VJ69_9CYAN
peptidase M28 family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M28
13_1_40cm_scaffold_9854_2
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(1113..1538)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000365C6D8
putative metal-dependent hydrolase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
cyclase
13_1_40cm_scaffold_9854_3
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1687..2079)
DNA (393bp) protein (131aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5B9K3_9MYCO
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF25598.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
transcriptional regulator
13_1_40cm_scaffold_9854_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2248..2520
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
13_1_40cm_scaffold_9854_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2522..3268)
DNA (747bp) protein (249aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Alpha/beta hydrolase fold n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR4_RUBXD
alpha/beta hydrolase fold protein domain-containing protein
13_1_40cm_scaffold_9854_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3265..4200)
DNA (936bp) protein (312aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ17_9EURY
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
pyridoxal-phosphate dependent enzyme family protein
13_1_40cm_scaffold_9854_7
unknown

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4214..4348
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_scaffold_9854_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4446..5447
DNA (1002bp) protein (334aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
13_1_40cm_scaffold_9854_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5444..5752)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF59
13_1_40cm_scaffold_9854_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5776..6150)
DNA (375bp) protein (125aa)
Putative thiol-disulphide oxidoreductase DCC id=4956253 bin=GWC2_Methylomirabilis_70_16 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiol-disulfide oxidoreductase DCC Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_9854_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6137..7264)
DNA (1128bp) protein (376aa)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_1_40cm_scaffold_9854_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7276..8292)
DNA (1017bp) protein (339aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_1_40cm_scaffold_9854_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8367..8999)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 13 items

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