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13_1_40cm_scaffold_1239

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1239_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1..531)
DNA (531bp) protein (177aa)
hypothetical membrane protein id=14626219 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical membrane protein Tax=CSP1_6_Rokubacteria
Protein of unknown function DUF3341
13_1_40cm_scaffold_1239_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(528..1880)
DNA (1353bp) protein (451aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
Polysulfide reductase NrfD
13_1_40cm_scaffold_1239_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1873..4443)
DNA (2571bp) protein (857aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_5_NC10
putative oxidoreductase
13_1_40cm_scaffold_1239_4
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4424..4783)
DNA (360bp) protein (120aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RBG_13_Deltaproteobacteria_65_10_curated
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative oxidoreductase
13_1_40cm_scaffold_1239_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4785..5186)
DNA (402bp) protein (134aa)
cytochrome c3 (EC:1.7.2.2) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c3
13_1_40cm_scaffold_1239_6
unknown

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comp(5464..5925)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_scaffold_1239_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5935..7074)
DNA (1140bp) protein (380aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_1_40cm_scaffold_1239_8
unknown

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comp(7052..7369)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_scaffold_1239_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7366..8505)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_1239_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8471..9205)
DNA (735bp) protein (245aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
13_1_40cm_scaffold_1239_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9602..10285)
DNA (684bp) protein (228aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDQ8_9BACL
dihydrodipicolinate synthetase
13_1_40cm_scaffold_1239_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10224..11210)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1239_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11210..12010)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1239_14
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12065..12631
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU58_SPHAL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
13_1_40cm_scaffold_1239_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12628..13779)
DNA (1152bp) protein (384aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
13_1_40cm_scaffold_1239_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13739..14491)
DNA (753bp) protein (251aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_1_40cm_scaffold_1239_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14488..17256)
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Heparinase II/III family protein
13_1_40cm_scaffold_1239_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17250..18263)
DNA (1014bp) protein (338aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=GWC2_Gemmatimonadetes_71_10_curated
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
GHMP kinase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6FA7D
13_1_40cm_scaffold_1239_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18260..19687)
DNA (1428bp) protein (476aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT
putative peptide ABC transporter substrate binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peptide ABC transporter substrate binding protein
13_1_40cm_scaffold_1239_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19713..20690
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EH22_CHLL2
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
13_1_40cm_scaffold_1239_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20687..21529
DNA (843bp) protein (281aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
ABC-type transporter, integral membrane subunit
putative peptide ABC transporter permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_1239_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21526..21840)
DNA (315bp) protein (105aa)
Esterase/lipase, putative n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H763_SALRM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Esterase/lipase
13_1_40cm_scaffold_1239_23
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(22090..24714)
DNA (2625bp) protein (875aa)
Glycoside hydrolase, family 38 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZX7_RUBXD
glycoside hydrolase family 38
Glycoside hydrolase, family 38 Tax=S_OP1_64_32
13_1_40cm_scaffold_1239_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24711..26036)
DNA (1326bp) protein (442aa)
transaldolase phosphoglucose isomerase (EC:2.2.1.2 5.3.1.9); K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transaldolase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN87_9GAMM
transaldolase
13_1_40cm_scaffold_1239_25
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26084..28639
DNA (2556bp) protein (852aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACL24901.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source=
13_1_40cm_scaffold_1239_26

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comp(28623..29606)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_scaffold_1239_27

Not on your lists

comp(29554..31080)
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_scaffold_1239_28
unknown

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comp(31084..31596)
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_scaffold_1239_29

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comp(31593..32450)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89250.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_scaffold_1239_30
unknown

Not on your lists

comp(32447..32911)
DNA (465bp) protein (155aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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