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13_1_40cm_scaffold_5816

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5816_1
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_16_Gamma2_64_11_curated
D-alanine--D-alanine ligase domain protein id=1761207 bin=GWD2_Deltaproteobacteria_55_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
D-alanine--D-alanine ligase
13_1_40cm_scaffold_5816_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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711..1712
DNA (1002bp) protein (334aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_5816_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1781..2164)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_scaffold_5816_4
unknown

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comp(2161..2391)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_5816_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2421..2672)
DNA (252bp) protein (84aa)
Putative cytochrome c n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z8_GEMAT
putative cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:BAH38708.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
13_1_40cm_scaffold_5816_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3357..5054)
DNA (1698bp) protein (566aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
FAD dependent oxidoreductase
13_1_40cm_scaffold_5816_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5136..6395
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_scaffold_5816_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6395..8518
DNA (2124bp) protein (708aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
fadJ; enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.-)
Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM1_GEMAT
13_1_40cm_scaffold_5816_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8521..8829
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_5816_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9824..11089
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_5816_11
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11066..11596)
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
13_1_40cm_scaffold_5816_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11623..11886
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_5816_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11901..12401
DNA (501bp) protein (167aa)
Amidohydrolase 3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMP8_9BACT
hypothetical protein; K07047 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Amidohydrolase 3
Displaying 13 items

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