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13_1_40cm_scaffold_7792

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7792_1

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2..1723
DNA (1722bp) protein (574aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=mine drainage metagenome RepID=T1CLS4_9ZZZZ
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EQD69760.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_7792_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1713..2567
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000366E2A1
oxidoreductase, short chain dehydrogenase
Oxidoreductase, short chain dehydrogenase {ECO:0000313|EMBL:ACJ01286.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" sou
13_1_40cm_scaffold_7792_3
unknown

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2617..2979
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_scaffold_7792_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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2976..4154
DNA (1179bp) protein (393aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Probable lipoprotein id=3393305 bin=GWC2_Ignavibacteria_56_12 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_scaffold_7792_5
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(4129..4599)
DNA (471bp) protein (157aa)
MarR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E4A
MarR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIQ00588.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_40cm_scaffold_7792_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4761..5129)
DNA (369bp) protein (123aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative pilin
13_1_40cm_scaffold_7792_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(5325..6656)
DNA (1332bp) protein (444aa)
Curli production assembly/transport component CsgG n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPN7_KORVE
curli production assembly/transport component CsgG Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
curli production assembly/transport component CsgG
13_1_40cm_scaffold_7792_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6859..7521
DNA (663bp) protein (221aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_1_40cm_scaffold_7792_9
unknown

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7574..8203
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_scaffold_7792_10
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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8224..8745
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFF5_KOSOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR80364.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
13_1_40cm_scaffold_7792_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8810..9352
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase ECF-type sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_7792_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9349..9948
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_7792_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9948..11144
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying 13 items

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