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13_1_40cm_scaffold_11593

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_11593_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative pilin
13_1_40cm_scaffold_11593_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(564..794)
DNA (231bp) protein (77aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
13_1_40cm_scaffold_11593_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(764..2044)
DNA (1281bp) protein (427aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=GUAA_GEMAT
GMP synthase [glutamine-hydrolyzing]
13_1_40cm_scaffold_11593_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2041..3312)
DNA (1272bp) protein (424aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
diaminopimelate decarboxylase
13_1_40cm_scaffold_11593_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(3352..4845)
DNA (1494bp) protein (498aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Proline--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X0_GEMAT
Prolyl-tRNA synthetase
13_1_40cm_scaffold_11593_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(4845..6113)
DNA (1269bp) protein (423aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X1_GEMAT
13_1_40cm_scaffold_11593_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6123..6386)
DNA (264bp) protein (88aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X2_GEMAT
13_1_40cm_scaffold_11593_8
unknown

Not on your lists

6833..7057
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_scaffold_11593_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7284..8141)
DNA (858bp) protein (286aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X3_GEMAT
13_1_40cm_scaffold_11593_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8217..9464)
DNA (1248bp) protein (416aa)
Rod shape determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X4_GEMAT
mrdB; rod shape determining protein; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein RodA
13_1_40cm_scaffold_11593_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9436..11166)
DNA (1731bp) protein (577aa)
Penicillin-binding protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X5_GEMAT
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mrdA; penicillin-binding protein 2
13_1_40cm_scaffold_11593_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11305..11802)
DNA (498bp) protein (166aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X6_GEMAT
hypothetical membrane protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_scaffold_11593_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11799..12647)
DNA (849bp) protein (283aa)
Rod shape-determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X7_GEMAT
rod shape-determining protein; K03570 rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein
13_1_40cm_scaffold_11593_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12653..13636)
DNA (984bp) protein (328aa)
Rod shape-determining protein MreB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X8_GEMAT
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_Gemmatimonadetes_66_8_curated
mreB; rod shape-determining protein MreB
13_1_40cm_scaffold_11593_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13792..15444)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG87858.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 15 items

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