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13_1_40cm_scaffold_1285

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1285_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..695
DNA (693bp) protein (231aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA13_GEMAT
pilT; twitching mobility protein; K02669 twitching motility protein PilT Tax=RBG_16_Gemmatimonadetes_66_8_curated
twitching motility protein
13_1_40cm_scaffold_1285_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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716..1921
DNA (1206bp) protein (402aa)
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Type II secretion system F domain-containing protein
13_1_40cm_scaffold_1285_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2231..3826
DNA (1596bp) protein (532aa)
two-component histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X0_GEMAT
two-component histidine kinase
13_1_40cm_scaffold_1285_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3823..5217
DNA (1395bp) protein (465aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W9_GEMAT
NtrC family two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
sigma-54 factor interaction domain-containing protein
13_1_40cm_scaffold_1285_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5214..5798
DNA (585bp) protein (195aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1285_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5738..6841
DNA (1104bp) protein (368aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1285_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6841..7548
DNA (708bp) protein (236aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal RNA adenine methylase transferase id=12554429 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal RNA adenine methylase transferase
13_1_40cm_scaffold_1285_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7545..8285
DNA (741bp) protein (247aa)
Glycosyl transferase family 2 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVW3_OPITP
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycosyl transferase family protein
13_1_40cm_scaffold_1285_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8264..9787
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3A9_ISOPI
Uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_1285_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9765..11282
DNA (1518bp) protein (506aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UH26_ANASK
transmembrane and TPR repeat-containing protein CG4341-like Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_1285_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11279..12817
DNA (1539bp) protein (513aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JE21_ANAD2
transmembrane and TPR repeat-containing protein CG4341-like Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_1285_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12888..14042
DNA (1155bp) protein (385aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF8_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
two-component histidine kinase
13_1_40cm_scaffold_1285_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14039..15400
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INN6_ANADE
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_1285_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15536..15979
DNA (444bp) protein (148aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1285_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15976..16350
DNA (375bp) protein (125aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1285_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16338..16679
DNA (342bp) protein (114aa)
Type II secretory pathway component PulJ-like n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LLC9_SYNFM
Type II secretory pathway component PulJ-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 16 items

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