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13_1_40cm_scaffold_4610_10

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: 8902..9429

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 175.0
  • Bit_score: 273
  • Evalue 1.40e-70
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 176.0
  • Bit_score: 306
  • Evalue 2.70e-80
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 176.0
  • Bit_score: 276
  • Evalue 4.60e-72

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 528
ATGGCCCGATCGACGACAGGCAAGGCGAAAGCGTTCTTTCGCGCCAACCCGTCGGGTGCATTCGACCAATACCTCCAGGACATCCAGAAGCTGCCGTTGATCAAGGACCCCGCCGAAGAGCGCCGCCTGGCGCGGCGGGTCCAGCGCGGGGACGAAAAGGCCGCCGAGCGGCTCGTCACCGCCAACCTCCGGTTCGTCATCTCCTACGTCAAGAAGTACCAGGGACACGGCCTCGACCTCTCCGAGCTGGTGGCCATCGGCAACGAGGGGCTGCTGAAAGCGGTCAAGAAGTTCGATCCCGATCAGGGCGTGAAGTTCATCTCATACGCAGTGTGGTGGGTGCGGCAGGCGGTGCTGAAGGCGCTCGCCGAGCAGACCCGTAGCGTGCGCATCCCGCTGAACCAGAACTCTCAGCTCATCCGGATGAGCCGGACCGAGACGTACCTGTCTCACGAGCTGGGGCGGGAGCCGACGGACGACGAGATCGCGCAGGCGCTGGAGGACACGGTCGAGAACGTCCGCACCGCG
PROTEIN sequence
Length: 176
MARSTTGKAKAFFRANPSGAFDQYLQDIQKLPLIKDPAEERRLARRVQRGDEKAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDQGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSQLIRMSRTETYLSHELGREPTDDEIAQALEDTVENVRTA