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13_1_40cm_scaffold_4610

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4610_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..732)
DNA (732bp) protein (244aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen
13_1_40cm_scaffold_4610_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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739..2436
DNA (1698bp) protein (566aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4610_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2433..3353
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4610_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3319..4857
DNA (1539bp) protein (513aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3N6_TERSS
13_1_40cm_scaffold_4610_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4924..5946)
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
13_1_40cm_scaffold_4610_6
unknown

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5969..6700
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_40cm_scaffold_4610_7
unknown

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6675..6956
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_4610_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6973..7524
DNA (552bp) protein (184aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQI0_ROSCS
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_4610_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7521..8627
DNA (1107bp) protein (369aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=AROB_SYMTH
3-dehydroquinate synthase
13_1_40cm_scaffold_4610_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8902..9429
DNA (528bp) protein (176aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
Displaying 10 items

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