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13_1_40CM_Gemmatimonadetes_70_11

13_1_40CM_1_Gemmatimonadetes_70_11

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Description

22cls

Displaying items 1-50 of 123 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_scaffold_6361
Species: RBG_16_Gemmatimonadetes_66_8_curated (60%)
5 8135 bp 69.86 10.00 96.55
13_1_40cm_scaffold_11778
Domain: Bacteria (100%)
6 8317 bp 67.75 10.17 88.45
13_1_40cm_scaffold_16469
Phylum: Gemmatimonadetes (66.67%)
6 8151 bp 71.60 11.24 97.75
13_1_40cm_scaffold_2014
Species: RLO_Gemmatimonadetes_68_9 (100%)
7 10704 bp 69.44 11.70 98.23
13_1_40cm_scaffold_3748
Domain: Bacteria (71.43%)
7 8551 bp 69.84 19.67 93.29
13_1_40cm_scaffold_3939
Domain: Bacteria (71.43%)
7 10210 bp 69.76 12.32 88.82
13_1_40cm_scaffold_2915
Phylum: Gemmatimonadetes (85.71%)
7 9075 bp 70.07 11.04 97.09
13_1_40cm_scaffold_13662
Domain: Bacteria (85.71%)
7 10414 bp 68.77 11.28 86.91
13_1_40cm_scaffold_16246
Species: R_Gemmatimonadetes_71_11 (62.5%)
8 8551 bp 70.31 10.36 88.66
13_1_40cm_scaffold_2575
Species: RLO_Gemmatimonadetes_68_9 (50%)
8 8393 bp 69.22 11.04 94.26
13_1_40cm_scaffold_7529
Species: RLO_Gemmatimonadetes_68_9 (50%)
8 9053 bp 70.94 6.93 96.50
13_1_40cm_scaffold_5986
Domain: Bacteria (87.5%)
8 11089 bp 66.73 11.70 89.21
13_1_40cm_scaffold_26737
Species: RLO_Gemmatimonadetes_68_9 (62.5%)
8 8381 bp 71.15 11.35 90.28
13_1_40cm_scaffold_1585
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
8 10104 bp 69.94 7.70 92.25
13_1_40cm_scaffold_29647
Phylum: Gemmatimonadetes (50%)
8 8785 bp 70.03 13.86 85.17
13_1_40cm_scaffold_3713
Phylum: Gemmatimonadetes (88.89%)
9 10309 bp 70.72 12.27 96.06
13_1_40cm_scaffold_4662
Phylum: Rokubacteria (77.78%)
9 9526 bp 71.15 5.93 97.28
13_1_40cm_scaffold_3554
Phylum: Gemmatimonadetes (77.78%)
9 10873 bp 69.26 10.71 93.51
13_1_40cm_scaffold_34622
Phylum: Gemmatimonadetes (88.89%)
9 8388 bp 71.90 14.21 97.25
13_1_40cm_scaffold_20746
Phylum: Gemmatimonadetes (100%)
9 8316 bp 71.60 12.41 96.10
13_1_40cm_scaffold_2183
Domain: Bacteria (100%)
9 10688 bp 72.56 14.28 97.40
13_1_40cm_scaffold_31304
Domain: Bacteria (66.67%)
9 9362 bp 72.30 6.86 74.95
13_1_40cm_scaffold_2244
Phylum: Rokubacteria (88.89%)
9 8843 bp 70.38 5.65 94.41
13_1_40cm_scaffold_26339
Domain: Bacteria (100%)
9 8883 bp 68.93 9.89 87.13
13_1_40cm_scaffold_1735
Phylum: Gemmatimonadetes (66.67%)
9 9761 bp 69.95 12.09 96.11
13_1_40cm_scaffold_5975
Domain: Bacteria (50%)
10 11769 bp 71.40 11.35 94.77
13_1_40cm_scaffold_2515
Domain: Bacteria (80%)
10 9091 bp 68.72 10.52 92.99
13_1_40cm_scaffold_5931
Phylum: Gemmatimonadetes (50%)
10 12436 bp 73.24 12.07 80.33
13_1_40cm_scaffold_6968
Phylum: Gemmatimonadetes (80%)
10 10220 bp 70.34 11.71 91.70
13_1_40cm_scaffold_2476 10 9316 bp 68.98 9.78 86.72
13_1_40cm_scaffold_4713
Phylum: Gemmatimonadetes (90%)
10 14606 bp 69.05 10.90 95.98
13_1_40cm_scaffold_1930
Domain: Bacteria (50%)
10 9392 bp 67.60 15.82 84.28
13_1_40cm_scaffold_9743
Phylum: Gemmatimonadetes (90%)
10 10088 bp 69.66 11.25 94.24
13_1_40cm_scaffold_2239
Class: Gemmatimonadetes (50%)
10 11607 bp 68.40 9.41 79.46
13_1_40cm_scaffold_4610
Phylum: Gemmatimonadetes (80%)
10 9431 bp 69.29 12.00 96.64
13_1_40cm_scaffold_20665
Species: R_Gemmatimonadetes_71_11 (50%)
10 9592 bp 73.25 15.47 85.35
13_1_40cm_scaffold_943
Domain: Bacteria (90.91%)
11 14418 bp 69.43 13.25 92.53
13_1_40cm_scaffold_4294
Phylum: Gemmatimonadetes (90.91%)
11 12740 bp 71.30 10.78 98.76
13_1_40cm_scaffold_15628
Phylum: Gemmatimonadetes (63.64%)
11 8963 bp 68.81 11.96 99.38
13_1_40cm_scaffold_42753
Domain: Bacteria (72.73%)
11 9821 bp 71.15 13.01 84.28
13_1_40cm_scaffold_5822
Phylum: Gemmatimonadetes (54.55%)
11 14184 bp 70.64 13.68 96.02
13_1_40cm_scaffold_3753
Phylum: Gemmatimonadetes (72.73%)
11 9765 bp 70.62 7.40 98.53
13_1_40cm_scaffold_2250
Species: RLO_Gemmatimonadetes_68_9 (72.73%)
11 10344 bp 70.90 12.69 97.59
13_1_40cm_scaffold_16003
Domain: Bacteria (90.91%)
11 10990 bp 69.55 14.02 86.89
13_1_40cm_scaffold_12043
Phylum: Gemmatimonadetes (90.91%)
11 9775 bp 68.54 7.32 90.45
13_1_40cm_scaffold_3252
Phylum: Gemmatimonadetes (63.64%)
11 14657 bp 68.45 11.13 91.35
13_1_40cm_scaffold_3866
Domain: Bacteria (90.91%)
11 12375 bp 68.95 9.86 82.79
13_1_40cm_scaffold_14788
Domain: Bacteria (90.91%)
11 11092 bp 71.11 11.95 97.31
13_1_40cm_scaffold_8575
Phylum: Gemmatimonadetes (72.73%)
11 11399 bp 70.52 7.49 93.93
13_1_40cm_scaffold_3013
Phylum: Gemmatimonadetes (81.82%)
11 13562 bp 68.51 12.10 79.97
Displaying items 1-50 of 123 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.