ggKbase | organisms

Consensus taxonomy: Gemmatimonadetes → Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %

Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2

Displaying items 301-350 of 1121 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_2_scaffold_331385 Class: Gemmatimonadetes (66.67%)	3	1049 bp	59.20	1.86	93.80
13_1_40cm_2_scaffold_91552 Species: Gemmatimonadetes bacterium KBS708 (100%)	3	1990 bp	60.55	1.81	101.31
13_1_40cm_2_scaffold_189609 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1392 bp	62.00	2.16	92.46
13_1_40cm_2_scaffold_259801 Species: Gemmatimonas aurantiaca (50%)	2	1189 bp	58.87	2.90	97.90
13_1_40cm_2_scaffold_189840 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1391 bp	59.02	3.67	95.97
13_1_40cm_2_scaffold_75929 Species: R_Gemmatimonadetes_71_11 (50%)	2	2176 bp	57.40	3.10	72.38
13_1_40cm_2_scaffold_495684 Species: R_Acidobacteria_68_18 (50%)	2	1243 bp	58.89	2.17	112.95
13_1_40cm_2_scaffold_164036 Species: R_Acidobacteria_67_21 (50%)	2	1492 bp	58.04	2.71	94.71
13_1_40cm_2_scaffold_113931 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1788 bp	58.33	2.77	97.32
13_1_40cm_2_scaffold_243250 Species: RBG_13_OP8X_37_8_curated (50%)	2	1230 bp	57.56	2.56	84.63
13_1_40cm_2_scaffold_633509 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1025 bp	57.37	2.78	75.51
13_1_40cm_2_scaffold_150933 Species: RLO_PLX_64_10 (50%)	2	1554 bp	59.46	4.54	76.45
13_1_40cm_2_scaffold_273016 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1160 bp	61.72	2.84	85.34
13_1_40cm_2_scaffold_335708 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1040 bp	61.06	1.44	84.23
13_1_40cm_2_scaffold_337847 Species: R_Rokubacteria_73_56 (100%)	2	1036 bp	58.88	4.20	73.55
13_1_40cm_2_scaffold_311580 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1559 bp	57.99	3.75	91.02
13_1_40cm_2_scaffold_341382 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1028 bp	58.95	1.75	96.60
13_1_40cm_2_scaffold_280146 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1145 bp	58.86	1.83	100.09
13_1_40cm_2_scaffold_193762 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1377 bp	59.99	3.49	97.60
13_1_40cm_2_scaffold_120422 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1739 bp	61.24	2.85	90.91
13_1_40cm_2_scaffold_349722 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1010 bp	59.80	4.01	100.10
13_1_40cm_2_scaffold_317552 Species: marine sediment metagenome (50%)	2	1074 bp	61.27	2.65	87.99
13_1_40cm_2_scaffold_332881 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1046 bp	59.66	2.72	65.39
13_1_40cm_2_scaffold_137791 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1626 bp	58.06	2.58	99.08
13_1_40cm_2_scaffold_373979 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1432 bp	61.80	3.35	102.44
13_1_40cm_2_scaffold_146785 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1575 bp	58.73	3.14	88.95
13_1_40cm_2_scaffold_283391 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1138 bp	59.14	1.19	101.23
13_1_40cm_2_scaffold_170848 Species: Cystobacter violaceus (50%)	2	1463 bp	60.63	4.92	94.74
13_1_40cm_2_scaffold_65336 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2336 bp	62.03	2.70	97.73
13_1_40cm_2_scaffold_248588 Species: R_Acidobacteria_68_18 (50%)	2	2144 bp	60.49	5.04	84.10
13_1_40cm_2_scaffold_704920 Species: Gemmatimonas aurantiaca (50%)	2	1144 bp	60.49	2.49	82.60
13_1_40cm_2_scaffold_30662 Species: R_Acidobacteria_68_18 (50%)	2	3285 bp	62.04	4.47	72.97
13_1_40cm_2_scaffold_118694 Species: Inquilinus limosus (50%)	2	1752 bp	61.30	4.37	96.75
13_1_40cm_2_scaffold_253211 Species: Methylomonas denitrificans (50%)	2	1204 bp	61.88	1.62	59.05
13_1_40cm_2_scaffold_267771 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1171 bp	58.41	2.69	90.18
13_1_40cm_2_scaffold_622627 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1106 bp	58.23	2.17	90.05
13_1_40cm_2_scaffold_494441 Species: Gemmatimonas aurantiaca (50%)	2	1275 bp	60.08	4.12	71.06
13_1_40cm_2_scaffold_273489 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1159 bp	62.38	5.31	101.47
13_1_40cm_2_scaffold_70693 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2252 bp	58.08	2.06	95.91
13_1_40cm_2_scaffold_434588 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1585 bp	61.58	3.31	100.13
13_1_40cm_2_scaffold_64385 Species: R_Gemmatimonadetes_71_11 (50%)	2	2351 bp	60.14	2.36	93.53
13_1_40cm_2_scaffold_353900 Species: Gemmatimonas aurantiaca (50%)	2	1726 bp	57.36	2.61	89.86
13_1_40cm_2_scaffold_246808 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1220 bp	60.98	2.58	84.10
13_1_40cm_2_scaffold_312284 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (50%)	2	1084 bp	59.41	2.49	99.91
13_1_40cm_2_scaffold_155944 Species: RBG_16_Planctomycetes_59_8_curated (50%)	2	1529 bp	61.54	2.84	81.03
13_1_40cm_2_scaffold_278518 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1148 bp	60.02	2.22	65.85
13_1_40cm_2_scaffold_693004 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1227 bp	59.74	2.69	43.52
13_1_40cm_2_scaffold_190109 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1390 bp	59.21	2.16	85.68
13_1_40cm_2_scaffold_86522 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2588 bp	60.51	2.96	94.59
13_1_40cm_2_scaffold_89985 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2006 bp	59.42	2.39	96.61

Displaying items 301-350 of 1121 in total

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help