ggKbase | organisms

Consensus taxonomy: Gemmatimonadetes → Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %

Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2

Displaying items 351-400 of 1121 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_2_scaffold_451243 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1296 bp	58.87	2.55	86.81
13_1_40cm_2_scaffold_103877 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1870 bp	59.36	2.73	88.24
13_1_40cm_2_scaffold_252700 Species: Gemmatimonas aurantiaca (50%)	2	1206 bp	57.30	1.24	96.27
13_1_40cm_2_scaffold_305247 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1097 bp	59.53	2.19	85.32
13_1_40cm_2_scaffold_130171 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1673 bp	58.70	2.60	91.99
13_1_40cm_2_scaffold_48014 Species: Gemmatimonas aurantiaca (50%)	2	2691 bp	58.42	3.29	88.52
13_1_40cm_2_scaffold_215247 Species: RLO_PLX_64_10 (50%)	2	2050 bp	59.90	2.56	64.39
13_1_40cm_2_scaffold_124694 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)	2	1709 bp	57.58	5.00	87.24
13_1_40cm_2_scaffold_190112 Species: Gemmatimonas aurantiaca (50%)	2	1390 bp	62.30	2.70	98.63
13_1_40cm_2_scaffold_44565 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2784 bp	59.38	3.45	71.23
13_1_40cm_2_scaffold_236633 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1247 bp	58.14	3.01	78.67
13_1_40cm_2_scaffold_138728 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1620 bp	61.23	2.59	99.63
13_1_40cm_2_scaffold_247044 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1220 bp	60.82	2.34	94.18
13_1_40cm_2_scaffold_187898 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1398 bp	60.66	2.25	99.57
13_1_40cm_2_scaffold_446772 Species: RBG_13_Caldithrix_44_9_curated (50%)	2	1354 bp	57.61	1.77	100.81
13_1_40cm_2_scaffold_331645 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1048 bp	61.83	4.87	97.33
13_1_40cm_2_scaffold_276438 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1152 bp	60.24	3.52	98.44
13_1_40cm_2_scaffold_85522 Species: Gemmatimonas aurantiaca (50%)	2	2056 bp	58.27	2.48	100.10
13_1_40cm_2_scaffold_201154 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1352 bp	59.39	2.22	99.63
13_1_40cm_2_scaffold_219358 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1296 bp	59.65	2.66	99.77
13_1_40cm_2_scaffold_334789 Species: RBG_16_Planctomycetes_55_9_curated (50%)	2	1042 bp	59.21	2.02	99.04
13_1_40cm_2_scaffold_205369 Species: RBG_16_RIF_WS3X_71_46_curated (100%)	2	1338 bp	62.26	2.35	98.43
13_1_40cm_2_scaffold_215255 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1308 bp	60.40	2.52	104.13
13_1_40cm_2_scaffold_247282 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1219 bp	59.56	2.58	87.12
13_1_40cm_2_scaffold_111107 Species: Sinomonas sp. MUSC 117 (50%)	2	1810 bp	59.89	2.32	86.85
13_1_40cm_2_scaffold_194016 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1376 bp	60.97	2.73	96.80
13_1_40cm_2_scaffold_473880 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1478 bp	62.25	5.07	88.09
13_1_40cm_2_scaffold_276127 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1153 bp	57.50	1.43	85.08
13_1_40cm_2_scaffold_140356 Species: RBG_13_Caldithrix_44_9_curated (50%)	2	1611 bp	58.41	2.89	76.16
13_1_40cm_2_scaffold_127664 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1689 bp	58.67	2.22	80.11
13_1_40cm_2_scaffold_126605 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1696 bp	60.44	2.30	73.41
13_1_40cm_2_scaffold_205034 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1339 bp	61.24	2.24	100.15
13_1_40cm_2_scaffold_336450 Species: Gemmatimonas aurantiaca (100%)	2	1039 bp	58.90	2.31	99.90
13_1_40cm_2_scaffold_134151 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1648 bp	62.38	2.64	82.46
13_1_40cm_2_scaffold_584535 Species: Gemmatimonas aurantiaca (100%)	2	1104 bp	57.34	2.45	100.27
13_1_40cm_2_scaffold_295714 Species: R_Gemmatimonadetes_71_11 (50%)	2	1115 bp	57.94	4.98	89.60
13_1_40cm_2_scaffold_127435 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2336 bp	59.03	2.95	88.48
13_1_40cm_2_scaffold_121287 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1733 bp	60.47	4.24	98.67
13_1_40cm_2_scaffold_170412 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1465 bp	59.39	2.25	82.94
13_1_40cm_2_scaffold_227473 Species: Pyrinomonas methylaliphatogenes (50%)	2	1272 bp	61.08	1.77	86.56
13_1_40cm_2_scaffold_365722 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1573 bp	62.17	2.86	101.46
13_1_40cm_2_scaffold_251225 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1209 bp	62.03	2.98	89.08
13_1_40cm_2_scaffold_172912 Species: R_NC10_66_22 (50%)	2	1454 bp	57.70	1.86	96.35
13_1_40cm_2_scaffold_292973 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1120 bp	58.66	2.01	99.38
13_1_40cm_2_scaffold_128193 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1686 bp	59.79	2.14	100.00
13_1_40cm_2_scaffold_326337 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1058 bp	61.81	3.40	100.10
13_1_40cm_2_scaffold_219137 Species: RBG_13_Caldithrix_44_9_curated (50%)	2	1296 bp	58.95	1.62	87.50
13_1_40cm_2_scaffold_130418 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1671 bp	60.44	2.33	74.69
13_1_40cm_2_scaffold_140613 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1609 bp	59.35	3.92	93.97
13_1_40cm_2_scaffold_343158 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1024 bp	61.43	3.52	91.41

Displaying items 351-400 of 1121 in total

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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