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13_1_40CM_2_Gemmatimonadetes_60_3

In projects: 13_1_40CM_2  |  angelo_ncbi_2016  |  gemmatimonadetes_ggkbase  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %
Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Displaying items 401-450 of 1121 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_2_scaffold_200417
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (50%)
2 1355 bp 58.08 1.00 97.86
13_1_40cm_2_scaffold_173376
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1452 bp 62.26 4.75 101.86
13_1_40cm_2_scaffold_128196
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1686 bp 61.63 3.56 88.97
13_1_40cm_2_scaffold_233699
Species: Gemmatimonas aurantiaca (50%)
2 1255 bp 59.52 2.51 100.16
13_1_40cm_2_scaffold_532736
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1118 bp 60.55 2.42 99.82
13_1_40cm_2_scaffold_647678
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1050 bp 60.67 2.14 100.57
13_1_40cm_2_scaffold_239438
Species: Gemmatimonas aurantiaca (50%)
2 1240 bp 59.84 2.42 100.16
13_1_40cm_2_scaffold_422411
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 1442 bp 57.84 1.87 62.41
13_1_40cm_2_scaffold_103669
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1873 bp 61.51 4.32 54.62
13_1_40cm_2_scaffold_216839
Species: Terrabacter sp. 28 (50%)
2 1303 bp 57.33 2.53 86.57
13_1_40cm_2_scaffold_99861
Species: Sphingomonas changbaiensis (50%)
2 1907 bp 57.58 1.89 92.03
13_1_40cm_2_scaffold_319433
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1071 bp 61.06 3.78 63.31
13_1_40cm_2_scaffold_252266
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1207 bp 62.39 2.73 86.25
13_1_40cm_2_scaffold_50100
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2639 bp 58.62 2.79 97.08
13_1_40cm_2_scaffold_121933
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1729 bp 61.89 2.26 94.91
13_1_40cm_2_scaffold_352614
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 1003 bp 62.11 4.04 78.36
13_1_40cm_2_scaffold_186222
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1404 bp 60.47 2.56 97.44
13_1_40cm_2_scaffold_184213
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1904 bp 59.03 2.57 92.33
13_1_40cm_2_scaffold_342478
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 1026 bp 59.55 1.46 99.12
13_1_40cm_2_scaffold_118731
Species: Gemmatimonas aurantiaca (50%)
2 2391 bp 57.63 2.70 98.24
13_1_40cm_2_scaffold_346417
Species: R_Gemmatimonadetes_71_11 (50%)
2 1017 bp 62.24 4.42 94.69
13_1_40cm_2_scaffold_176800
Species: R_Acidobacteria_65_29 (100%)
2 1439 bp 61.15 3.54 94.65
13_1_40cm_2_scaffold_144314
Species: Gemmatimonas aurantiaca (50%)
2 1588 bp 61.08 3.31 72.36
13_1_40cm_2_scaffold_238427
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1242 bp 61.51 3.02 65.22
13_1_40cm_2_scaffold_189662
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1845 bp 58.27 2.60 81.79
13_1_40cm_2_scaffold_204824
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1340 bp 59.25 4.59 90.90
13_1_40cm_2_scaffold_265715
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1175 bp 60.85 2.04 99.57
13_1_40cm_2_scaffold_231825
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1260 bp 59.44 1.67 81.19
13_1_40cm_2_scaffold_174838
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1447 bp 61.58 2.18 91.43
13_1_40cm_2_scaffold_237737
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1841 bp 58.50 2.20 100.05
13_1_40cm_2_scaffold_280196
Species: Gemmatimonas aurantiaca (50%)
2 1145 bp 60.87 3.80 99.30
13_1_40cm_2_scaffold_98963
Species: R_Gammaproteobacteria_56_15 (50%)
2 1915 bp 62.09 2.66 94.46
13_1_40cm_2_scaffold_151699
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1550 bp 59.03 3.68 93.68
13_1_40cm_2_scaffold_135952
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1637 bp 61.03 2.84 91.26
13_1_40cm_2_scaffold_396003
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1445 bp 62.42 4.08 76.82
13_1_40cm_2_scaffold_249611
Species: Gemmatimonas aurantiaca (50%)
2 1213 bp 60.76 2.97 87.80
13_1_40cm_2_scaffold_569315
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1248 bp 60.90 1.92 87.98
13_1_40cm_2_scaffold_173624
Species: R_Gemmatimonadetes_71_11 (50%)
2 1452 bp 58.82 3.10 90.91
13_1_40cm_2_scaffold_257821
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1193 bp 59.85 2.89 86.00
13_1_40cm_2_scaffold_168643
Species: uncultured bacterium (50%)
2 1472 bp 58.36 1.83 96.40
13_1_40cm_2_scaffold_269978
Species: R_Deltaproteobacteria_38_15 (50%)
2 1166 bp 60.38 2.32 83.36
13_1_40cm_2_scaffold_149102
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1563 bp 59.69 2.69 80.23
13_1_40cm_2_scaffold_176495
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1440 bp 61.32 4.06 71.46
13_1_40cm_2_scaffold_536198
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1045 bp 62.30 4.59 100.19
13_1_40cm_2_scaffold_152167
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1548 bp 58.33 2.13 85.85
13_1_40cm_2_scaffold_201652
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1351 bp 62.47 2.11 90.60
13_1_40cm_2_scaffold_185779
Species: R_Acidobacteria_67_21 (50%)
2 1406 bp 61.10 1.60 94.95
13_1_40cm_2_scaffold_123577
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1717 bp 62.03 2.88 48.57
13_1_40cm_2_scaffold_345029
Species: marine sediment metagenome (50%)
2 1020 bp 61.18 2.65 98.53
13_1_40cm_2_scaffold_77989
Species: R_Gammaproteobacteria_37_14 (50%)
2 2149 bp 61.33 4.05 81.81
Displaying items 401-450 of 1121 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.