ggKbase | organisms

Consensus taxonomy: Gemmatimonadetes → Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %

Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2

Displaying items 751-800 of 1121 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_2_scaffold_105406 Species: R_Acidobacteria_67_28 (50%)	2	1858 bp	58.18	3.63	95.10
13_1_40cm_2_scaffold_169653 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1468 bp	61.24	2.55	88.49
13_1_40cm_2_scaffold_185673 Species: Gemmatimonas aurantiaca (50%)	2	1406 bp	58.75	2.03	90.68
13_1_40cm_2_scaffold_392626 Species: R_Gemmatimonadetes_71_11 (100%)	2	1453 bp	62.22	3.10	103.85
13_1_40cm_2_scaffold_183896 Species: Gemmatimonas aurantiaca (50%)	2	1413 bp	58.53	2.23	91.93
13_1_40cm_2_scaffold_326030 Species: R_Gemmatimonadetes_71_11 (50%)	2	1059 bp	58.92	1.70	75.92
13_1_40cm_2_scaffold_157509 Species: RBG_16_Gamma2_64_10_curated (50%)	2	1521 bp	61.67	3.35	90.73
13_1_40cm_2_scaffold_238567 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1242 bp	61.84	2.90	99.76
13_1_40cm_2_scaffold_206368 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1335 bp	58.58	1.57	98.88
13_1_40cm_2_scaffold_75662 Species: Gemmatimonas aurantiaca (50%)	2	3373 bp	58.88	2.71	99.97
13_1_40cm_2_scaffold_222540 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1286 bp	60.03	4.55	100.78
13_1_40cm_2_scaffold_463682 Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)	2	1429 bp	62.35	4.51	51.43
13_1_40cm_2_scaffold_329511 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1052 bp	57.41	1.57	97.24
13_1_40cm_2_scaffold_108560 Species: RBG_13_Caldithrix_44_9_curated (50%)	2	1831 bp	57.73	3.44	91.59
13_1_40cm_2_scaffold_201786 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1350 bp	60.59	2.67	93.56
13_1_40cm_2_scaffold_150154 Species: R_Gammaproteobacteria_56_15 (50%)	2	1558 bp	57.89	1.54	93.00
13_1_40cm_2_scaffold_293133 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1120 bp	57.41	2.28	78.21
13_1_40cm_2_scaffold_66690 Species: Gemmatimonas aurantiaca (50%)	2	2314 bp	58.04	3.24	90.75
13_1_40cm_2_scaffold_302998 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1101 bp	58.13	3.00	93.73
13_1_40cm_2_scaffold_171166 Species: CG_Ignavi_01 (50%)	2	1462 bp	62.31	4.92	99.32
13_1_40cm_2_scaffold_183608 Species: Gemmatimonas aurantiaca (50%)	2	2741 bp	60.56	1.75	70.05
13_1_40cm_2_scaffold_74605 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2195 bp	57.49	4.10	94.85
13_1_40cm_2_scaffold_251852 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1208 bp	60.68	2.11	99.34
13_1_40cm_2_scaffold_160354 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1508 bp	58.75	2.39	100.27
13_1_40cm_2_scaffold_211719 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1318 bp	60.17	2.39	100.15
13_1_40cm_2_scaffold_162393 Species: Gemmatimonas aurantiaca (50%)	2	2396 bp	60.68	2.82	99.42
13_1_40cm_2_scaffold_89707 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2011 bp	60.96	3.88	97.56
13_1_40cm_2_scaffold_334985 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1475 bp	59.73	2.75	93.15
13_1_40cm_2_scaffold_95950 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1945 bp	59.33	3.39	99.02
13_1_40cm_2_scaffold_152213 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1547 bp	59.28	2.81	98.13
13_1_40cm_2_scaffold_292342 Species: R_Acidobacteria_65_29 (50%)	2	1121 bp	59.95	2.54	92.86
13_1_40cm_2_scaffold_230156 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1265 bp	57.39	1.19	86.09
13_1_40cm_2_scaffold_122321 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1726 bp	60.72	2.26	82.73
13_1_40cm_2_scaffold_181564 Species: Gemmatimonas aurantiaca (50%)	2	1421 bp	61.08	2.11	99.44
13_1_40cm_2_scaffold_102544 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1883 bp	60.54	1.99	100.21
13_1_40cm_2_scaffold_233866 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1255 bp	62.15	1.20	97.05
13_1_40cm_2_scaffold_197210 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1365 bp	59.63	2.31	74.95
13_1_40cm_2_scaffold_90173 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2004 bp	58.73	2.92	73.35
13_1_40cm_2_scaffold_187622 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1399 bp	59.97	1.93	90.49
13_1_40cm_2_scaffold_198158 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1362 bp	57.27	2.53	85.68
13_1_40cm_2_scaffold_333446 Species: Gemmatimonas aurantiaca (100%)	2	1045 bp	60.57	3.44	100.19
13_1_40cm_2_scaffold_531137 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1272 bp	60.53	2.95	74.53
13_1_40cm_2_scaffold_343333 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	1024 bp	58.11	2.34	68.55
13_1_40cm_2_scaffold_253998 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1203 bp	57.27	3.37	94.76
13_1_40cm_2_scaffold_96358 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	3172 bp	60.31	1.99	61.19
13_1_40cm_2_scaffold_104071 Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (50%)	2	1869 bp	59.39	3.85	96.95
13_1_40cm_2_scaffold_61248 Species: Gemmatimonadetes bacterium KBS708 (100%)	2	2405 bp	60.71	3.43	97.92
13_1_40cm_2_scaffold_89608 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2010 bp	57.51	3.21	86.72
13_1_40cm_2_scaffold_341364 Species: RLO_Gemmatimonadetes_68_9 (100%)	2	1028 bp	61.48	2.04	98.05
13_1_40cm_2_scaffold_75915 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	2177 bp	61.60	2.55	93.98

Displaying items 751-800 of 1121 in total

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_2_Gemmatimonadetes_60_3

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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