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13_1_40cm_scaffold_1618

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1618_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..1503
DNA (1503bp) protein (501aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CA59_MYXFH
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
potassium uptake protein
13_1_40cm_scaffold_1618_2
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1521..3626)
DNA (2106bp) protein (702aa)
acetate--CoA ligase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Acetyl-coenzyme A synthetase id=4380013 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_1_40cm_scaffold_1618_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3895..4212
DNA (318bp) protein (106aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_1618_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4261..4635
DNA (375bp) protein (125aa)
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Histidine kinase id=4097828 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_scaffold_1618_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4673..5338
DNA (666bp) protein (222aa)
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=24485110 bin=RBG_19FT_COMBO_GAL15_69_19 species=Slackia piriformis genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cytochrome ABC transporter ATP-binding component
13_1_40cm_scaffold_1618_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5331..6011
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_scaffold_1618_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6008..6679
DNA (672bp) protein (224aa)
Heme exporter protein C n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F8_THERP
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_scaffold_1618_8
unknown

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6672..6782
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_scaffold_1618_9
unknown

Not on your lists

comp(7086..7670)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_scaffold_1618_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

7713..8540
DNA (828bp) protein (276aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Arma_01
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSI5_9FIRM
13_1_40cm_scaffold_1618_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8537..9463
DNA (927bp) protein (309aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA38_GEMAT
13_1_40cm_scaffold_1618_12
unknown

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comp(9265..9849)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_scaffold_1618_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10055..10360
DNA (306bp) protein (102aa)
Delta-aminolevulinic acid dehydratase id=1871332 bin=GWB2_Proteobacteria_55_19 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
porphobilinogen synthase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
delta-aminolevulinic acid dehydratase
13_1_40cm_scaffold_1618_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(10365..11051)
DNA (687bp) protein (229aa)
MIP family channel protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
MIP family channel protein {ECO:0000313|EMBL:EFH89860.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
major intrinsic protein
13_1_40cm_scaffold_1618_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11101..12324)
DNA (1224bp) protein (408aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_40cm_scaffold_1618_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12342..12809)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Polyketide cyclase/dehydrase
13_1_40cm_scaffold_1618_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12828..13568)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA33_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1618_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13565..14047)
DNA (483bp) protein (161aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA32_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
flavin reductase domain protein FMN-binding protein
13_1_40cm_scaffold_1618_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14050..15330)
DNA (1281bp) protein (427aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA31_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative oxidoreductase
13_1_40cm_scaffold_1618_20
unknown

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comp(15382..15792)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_scaffold_1618_21
unknown

Not on your lists

comp(15783..15938)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 21 items

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