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13_1_40cm_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_200_trna_1
unknown

Not on your lists

51..124
DNA (74bp)
transferRNA
13_1_40cm_scaffold_200_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(401..2482)
DNA (2082bp) protein (694aa)
Potassium/proton antiporter RosB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQK1_9DELT
Potassium transporter {ECO:0000313|EMBL:KFA86761.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cyst
ybaL; putative transporter
13_1_40cm_scaffold_200_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2741..3622)
DNA (882bp) protein (294aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF21
13_1_40cm_scaffold_200_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3713..4351)
DNA (639bp) protein (213aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SecF protein
13_1_40cm_scaffold_200_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4551..4937
DNA (387bp) protein (129aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter sp. AP07 RepID=J3ADQ4_9CAUL
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJL30381.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
beta-lactamase
13_1_40cm_scaffold_200_5
unknown

Not on your lists

5077..5454
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_scaffold_200_6
unknown

Not on your lists

comp(5482..5739)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_200_7
unknown

Not on your lists

6112..6465
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_scaffold_200_8
unknown

Not on your lists

comp(6473..7132)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_scaffold_200_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7129..8190)
DNA (1062bp) protein (354aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_200_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8187..9725)
DNA (1539bp) protein (513aa)
hypothetical protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGP7_ROSCS
protein kinase
13_1_40cm_scaffold_200_11
unknown

Not on your lists

comp(9722..11395)
DNA (1674bp) protein (558aa)

This feature has no annotations

13_1_40cm_scaffold_200_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11464..12780)
DNA (1317bp) protein (439aa)
Putative conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) id=1866192 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein of unknown function DUF58
13_1_40cm_scaffold_200_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12777..13676)
DNA (900bp) protein (300aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase AAA n=1 Tax=Streptomyces acidiscabies RepID=UPI0002889B59
ATPase associated with various cellular activities AAA_3
13_1_40cm_scaffold_200_14
unknown

Not on your lists

comp(13673..14335)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_scaffold_200_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14864..15490)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6L2_9SPHN
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_200_16
unknown

Not on your lists

comp(15508..16353)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_scaffold_200_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16396..18219
DNA (1824bp) protein (608aa)
Integral membrane protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JNY0_PSEST
protein of unknown function DUF95 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_200_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18311..18502)
DNA (192bp) protein (64aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_200_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18502..18786)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_200_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18931..20043)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH96_9BACT
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_200_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20181..21434
DNA (1254bp) protein (418aa)
Transcription termination factor Rho n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEU2_9BACT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
13_1_40cm_scaffold_200_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21449..21868
DNA (420bp) protein (140aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_scaffold_200_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21880..22962
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_200_24
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22913..23509)
DNA (597bp) protein (199aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7C4_9DELT
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_scaffold_200_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

23535..23903
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=RBG_16_Chloroflexi_63_12_curated
Chorismate mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVT5_ROSS1
chorismate mutase
13_1_40cm_scaffold_200_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23900..25081
DNA (1182bp) protein (394aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_40cm_scaffold_200_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25110..25988
DNA (879bp) protein (293aa)
cation transporter n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002FE3B55
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
13_1_40cm_scaffold_200_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25982..26836
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_200_29
unknown

Not on your lists

26954..27118
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

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