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13_1_40cm_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_59_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_59_2
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(557..1006)
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AGN17529.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source=
13_1_40cm_scaffold_59_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1020..3005)
DNA (1986bp) protein (662aa)
hypothetical protein; K06888 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_scaffold_59_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3089..4297)
DNA (1209bp) protein (403aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_scaffold_59_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4249..4929)
DNA (681bp) protein (227aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN5_RUBXD
13_1_40cm_scaffold_59_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4951..5793)
DNA (843bp) protein (281aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
13_1_40cm_scaffold_59_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5815..7590
DNA (1776bp) protein (592aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter inner membrane subunit
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_scaffold_59_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7587..8894
DNA (1308bp) protein (436aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
taurine ABC transporter ATP-binding protein
13_1_40cm_scaffold_59_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9118..9576)
DNA (459bp) protein (153aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
13_1_40cm_scaffold_59_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9624..10193
DNA (570bp) protein (190aa)
Signal transduction histidine kinase, LytS n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVH5_ARTS2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase LytS
13_1_40cm_scaffold_59_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10190..10897
DNA (708bp) protein (236aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cobalt transport protein
13_1_40cm_scaffold_59_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10894..11670
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NS79_ROSCS
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_scaffold_59_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11667..12491
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI000348CBD4
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_scaffold_59_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12508..14238
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_59_15
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..14668)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Saccharibacter floricola RepID=UPI000373368D
DoxX family protein {ECO:0000313|EMBL:GAN55160.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sa
13_1_40cm_scaffold_59_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14644..15726)
DNA (1083bp) protein (361aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_scaffold_59_17
R_KAZAN_48_13, Kazan, Bacteria

Not on your lists

comp(15723..16718)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHP9_SORCE
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
hypothetical protein
13_1_40cm_scaffold_59_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16753..17637)
DNA (885bp) protein (295aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
ABC transporter periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
periplasmic binding protein
13_1_40cm_scaffold_59_19
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(17727..19898)
DNA (2172bp) protein (724aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAK9_SINAD
oligopeptide transporter Tax=RBG_16_Zixibacteria_50_21_curated
oligopeptide transporter
13_1_40cm_scaffold_59_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19977..21905
DNA (1929bp) protein (643aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_scaffold_59_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22146..23615
DNA (1470bp) protein (490aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_scaffold_59_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23599..24756)
DNA (1158bp) protein (386aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_40cm_scaffold_59_23
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

25048..27129
DNA (2082bp) protein (694aa)
kelch domain-containing protein Tax=GWF2_Elusimicrobia_62_30_curated
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
branched-chain amino acid ABC transporter2C amino acid-binding protein
13_1_40cm_scaffold_59_24
unknown

Not on your lists

comp(27189..27530)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_scaffold_59_25
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27938..28936
DNA (999bp) protein (333aa)
High-affinity leucine-specific transport system, periplasmic binding protein LivK {ECO:0000313|EMBL:KFE65315.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cyst
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_scaffold_59_26
RLO_PLX_64_10, Bacteria

Not on your lists

28908..29846
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C74EDD
hyalin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hyalin domain-containing protein
13_1_40cm_scaffold_59_27
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29906..31066)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LID1_CHLTF
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX05175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_59_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(31079..31459)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Leptospira licerasiae RepID=I0XV97_9LEPT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_59_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31414..32727)
DNA (1314bp) protein (438aa)
L-sorbosone dehydrogenase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AHG90403.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_59_30
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32724..33734)
DNA (1011bp) protein (337aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IU88_9PORP
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:ERJ71372.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
hypothetical protein
Displaying items 1-30 of 134 in total

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