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13_1_40cm_scaffold_1899

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1899_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2..394)
DNA (393bp) protein (131aa)
Carbon starvation protein CstA n=2 Tax=Geobacillus RepID=D7D334_GEOSC
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
carbon starvation protein CstA
13_1_40cm_scaffold_1899_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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454..798
DNA (345bp) protein (115aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_1899_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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798..1217
DNA (420bp) protein (140aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=uncultured bacterium RepID=Q565X5_9BACT
13_1_40cm_scaffold_1899_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1271..1849
DNA (579bp) protein (193aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1899_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1846..2631
DNA (786bp) protein (262aa)
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
icd1; isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABB3_GEMAT
13_1_40cm_scaffold_1899_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2734..3045
DNA (312bp) protein (104aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1899_7
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3042..4451
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HJ83_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV30453.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirill
hypothetical protein
13_1_40cm_scaffold_1899_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4448..5320
DNA (873bp) protein (291aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR5_RUBXD
metallophosphoesterase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_scaffold_1899_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5401..6588
DNA (1188bp) protein (396aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutaryl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA7_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_scaffold_1899_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6694..8328
DNA (1635bp) protein (545aa)
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit id=24469728 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
etfA; electron transfer flavoprotein subunit alpha
13_1_40cm_scaffold_1899_11
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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8359..10005
DNA (1647bp) protein (549aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
13_1_40cm_scaffold_1899_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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10242..11249
DNA (1008bp) protein (336aa)
Diguanylate cyclase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BBB8_TURPD
diguanylate cyclase Tax=RBG_16_Acidobacteria_70_10_curated
diguanylate cyclase
13_1_40cm_scaffold_1899_13
unknown

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11263..12057
DNA (795bp) protein (265aa)

This feature has no annotations

13_1_40cm_scaffold_1899_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(12062..13252)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HU88_9BACT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_scaffold_1899_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13249..14508)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5G4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89573.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1899_16
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14562..15380)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E7_9BACT id=5223510 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
diguanylate cyclase Tax=RBG_13_Deltaproteobacteria_61_14_curated
diguanylate cyclase
13_1_40cm_scaffold_1899_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15380..16618)
DNA (1239bp) protein (413aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] id=14626225 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
MoeA domain protein domain I and II
13_1_40cm_scaffold_1899_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(16620..17153)
DNA (534bp) protein (178aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_scaffold_1899_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(17135..17293)
DNA (159bp) protein (53aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 19 items

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