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13_1_40cm_scaffold_11217

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_11217_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(2..130)
DNA (129bp) protein (43aa)
ABC multidrug efflux pump, inner membrane subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5538
ABC multidrug efflux pump, inner membrane subunit Tax=RBG_13_Acidobacteria_68_16_curated
multidrug ABC transporter permease
13_1_40cm_scaffold_11217_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(123..1070)
DNA (948bp) protein (316aa)
ABC transporter ATPase id=24473775 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter ATPase Tax=RBG_16_RIF_WS3X_71_46_curated
ABC transporter ATPase
13_1_40cm_scaffold_11217_3
unknown

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comp(1067..1441)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_scaffold_11217_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1448..3031)
DNA (1584bp) protein (528aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_11217_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3051..4271)
DNA (1221bp) protein (407aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
multidrug resistance protein
13_1_40cm_scaffold_11217_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4268..5788)
DNA (1521bp) protein (507aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_11217_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(5785..6777)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361082A
ABC-type spermidine/putrescine transport systems ATPase component
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_scaffold_11217_8
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6774..7778)
DNA (1005bp) protein (335aa)
iron ABC transporter substrate-binding protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002DC8AF1
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
extracellular solute-binding protein
13_1_40cm_scaffold_11217_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7801..9246)
DNA (1446bp) protein (482aa)
LmbE family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFK8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
LmbE family protein
13_1_40cm_scaffold_11217_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9194..10213)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5C3_GEMAT
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
LmbE family protein
13_1_40cm_scaffold_11217_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(10177..11511)
DNA (1335bp) protein (445aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
Displaying 11 items

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