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13_1_40cm_scaffold_5217_9

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 6348..8204

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 604.0
  • Bit_score: 856
  • Evalue 1.90e-245
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 611.0
  • Bit_score: 812
  • Evalue 2.20e-232
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 604.0
  • Bit_score: 752
  • Evalue 1.00e-214

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1857
ATGGCTGACGACCCGACTCACCCGGAGAAGAAAGCCTTCACCCCCGGTGCCTGGCAGGAAGCCCGGGCGCTGATCTACGCCCACCGCCGCCGGTTGGCCGCAGGGCTCGGGCTGATGCTCGTCAACCGACTCGCCGGCCTCGTGCTGCCCTCGTCCTCGAAATGGGTGATCGACCGGGTGATCAACCAGCACCACGCGGAGCTGCTGCTGCCGCTCGCGATCGCGGCCGGCGCGGCGACGCTGGTGCAGGCGGTCACGGGATTCGGCCTGTCCCAGGTCCTCGGCGTGGCGGCCCAGCGCGCCATTACCGACATGCGCCGGACGGTGCAGGCCTTCGTCCTGCGGCTCCCGGTCAGCTACTTCGACTCGACGAAGAGCGGGATCCTGATTTCCCGGATCATGACCGACGCGGAGGGCATTCGGAATCTCGTCGGCACGGGGTTGGTGCAGCTGCTCGGAGGACTGCTCACGGCGGCGATCGCCTTGGCCGTGCTCTTCTATCTCAATTGGCGGCTCACCGCGATCGCGATCCTCATTCTGGCCTGCTTCGGCGGCGGCATGGCCCTCGCCTTCACCAAGCTGCGGCCGTTGTTCCGGGAGCGTGGCAAGCTCAACGCCGAGGTGACGGGGCGGCTCGGCGAGACGCTGGGCGGCATCCGCATCGTCAAAGCGTACCGCGCCGAGCGGGGCGAGCGGCTAGTGTTCACGCGCGGAGCGCACACGCTGTTCCGTAACATCGCCACGACGATGACGGGCATCTCCGCCGTCGGCGCGTTCGCCACGGTCATCATCGGCGCGATCGGCATCCTGATGATCCTCGAAGGCGGGCACGCGATCCTCTCGGGCGCCATGACGCTGGGCGACTTCTTCATGTACGGCATCTTCATCGGCCTCGTGGCGATGCCCCTGATCAACATCGCGGCGATCGGCACGCAGATCACGGAGGCGTTCGCCGGGCTCGACCGGATCCGCGAGATCCGCCGGCTCGCCACGGAGGACGCCGAGGACGGGACCCGGGCGCCGCTCGCCGACGTGACGGGCGACGTCGGCTTCGAGGACGTCAGCTTTGCGTACGTGCCCGGCAAGGATGTGCTGCGACACGTCTCCTTCCACGCGCCGCCGGGCTCCACCACGGCGCTGGTCGGCTCGTCGGGGGCGGGCAAGAGCACGTTGATCAGCCTGGTGCTGGCGTTCAGCCGCCCCCGGGCCGGGCGGATCGTCGTGGATCGCCGCGATCTCGCGACGGTCCGGCTCGCCGAGTACCGGCGCCAGCTCGGCGTCGTGCTGCAGGACAACTTCCTGTTCGACGGCACGATCGCCGAGAACATCGCGTTTGCGCGGCCCCATGCATCCCGGCCGGAGATCGAGGCGGCGGGGCGGATCGCCCACTGTGACGACTTCGTCCGGAAGTTCGAGCGGGGCTACGACACGGTCGTCGGAGAGCGCGGTGTGAAGCTCTCGGGTGGCGAGCGCCAGCGGGTCTCGATCGCCCGGGCGATCCTCGCCGACCCGCGCATCCTGATCCTGGACGAGGCGACCTCGAGCCTCGACTCGGAGAGCGAGGCGGCCATTCAGGACGGACTGCGCACGCTGCGGCGCGGCCGCACGACGTTCGTCATCGCCCACCGCCTCTCAACCATCCGCAGCGCGGATCAGATCCTCGTGATGGAGGGTGGCGAGATCGTCGAGCGCGGCACCCACACGGAGCTGCTCGCCCGACGGGGGCGTTACCGGCAGCTGTACGACAAGCAGTACCGATTCGAAAAGGATCTCTTCATCAACCCGGGGGAGGACTTCACGCCGGAGCCGGAGGCGCCGGTGGTGACGGCCCCCATGACGCCGCCCGACCGGCTGTGA
PROTEIN sequence
Length: 619
MADDPTHPEKKAFTPGAWQEARALIYAHRRRLAAGLGLMLVNRLAGLVLPSSSKWVIDRVINQHHAELLLPLAIAAGAATLVQAVTGFGLSQVLGVAAQRAITDMRRTVQAFVLRLPVSYFDSTKSGILISRIMTDAEGIRNLVGTGLVQLLGGLLTAAIALAVLFYLNWRLTAIAILILACFGGGMALAFTKLRPLFRERGKLNAEVTGRLGETLGGIRIVKAYRAERGERLVFTRGAHTLFRNIATTMTGISAVGAFATVIIGAIGILMILEGGHAILSGAMTLGDFFMYGIFIGLVAMPLINIAAIGTQITEAFAGLDRIREIRRLATEDAEDGTRAPLADVTGDVGFEDVSFAYVPGKDVLRHVSFHAPPGSTTALVGSSGAGKSTLISLVLAFSRPRAGRIVVDRRDLATVRLAEYRRQLGVVLQDNFLFDGTIAENIAFARPHASRPEIEAAGRIAHCDDFVRKFERGYDTVVGERGVKLSGGERQRVSIARAILADPRILILDEATSSLDSESEAAIQDGLRTLRRGRTTFVIAHRLSTIRSADQILVMEGGEIVERGTHTELLARRGRYRQLYDKQYRFEKDLFINPGEDFTPEPEAPVVTAPMTPPDRL*