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scnpilot_solids1_trim150_scaffold_2871_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2871_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..1046
DNA (1044bp) protein (348aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B1_GEMAT
scnpilot_solids1_trim150_scaffold_2871_curated_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1043..1858
DNA (816bp) protein (272aa)
Putative cell division protein FtsQ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B2_GEMAT
ftsQ; putative cell division protein FtsQ; K03589 cell division protein FtsQ
Putative cell division protein FtsQ {ECO:0000313|EMBL:BAH38472.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_2871_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1855..3111
DNA (1257bp) protein (419aa)
Cell division protein ftsA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B3_GEMAT
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ftsA; cell division protein FtsA; K03590 cell division protein FtsA
scnpilot_solids1_trim150_scaffold_2871_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3351..4634
DNA (1284bp) protein (428aa)
Cell division protein FtsZ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C1_GEMAT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ
scnpilot_solids1_trim150_scaffold_2871_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4631..5917
DNA (1287bp) protein (429aa)
Peptidase M23B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C2_GEMAT
Peptidase M23 {ECO:0000313|EMBL:AHG90618.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M23B family protein
scnpilot_solids1_trim150_scaffold_2871_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5984..7123
DNA (1140bp) protein (380aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C3_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90619.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein
scnpilot_solids1_trim150_scaffold_2871_curated_7
unknown

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7575..7763
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2871_curated_8
unknown

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comp(7704..7853)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2871_curated_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7874..8806
DNA (933bp) protein (311aa)
cell division protein FtsY n=1 Tax=Selenomonas bovis RepID=UPI000365EBF0
ftsY; cell division protein FtsY; K03110 fused signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_2871_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8807..10918
DNA (2112bp) protein (704aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C5_GEMAT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AHG90621.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2871_curated_11
unknown

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comp(10951..11496)
DNA (546bp) protein (182aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2871_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11550..13067)
DNA (1518bp) protein (506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
yclK; sensor histidine kinase YclK (EC:2.7.13.3)
Sensor histidine kinase YclK n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQQ7_THEPS
scnpilot_solids1_trim150_scaffold_2871_curated_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13343..13819
DNA (477bp) protein (159aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Asparagine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C9_GEMAT
Displaying 13 items

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