ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_10920

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10920_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..160
DNA (159bp) protein (53aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTI4_SOLCM
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_10920_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(157..990)
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MNL1_9BACT
ABC-3 protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_10920_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1007..2065)
DNA (1059bp) protein (353aa)
ABC-type metal ion transporter, periplasmic subunit Tax=Caldithrix abyssi DSM 13497 RepID=H1XT05_9BACT
troA; periplasmic zinc binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_10920_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2068..3381)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU2_SOLUE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_10920_5
unknown

Not on your lists

comp(3448..3795)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10920_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3913..4347
DNA (435bp) protein (145aa)
Osmotically inducible protein C Tax=Patulibacter medicamentivorans RepID=H0E0X0_9ACTN
Osmotically inducible protein C {ECO:0000313|EMBL:EHN12734.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
osmotically inducible protein OsmC
PLM4_65_b1_redo_sep16_scaffold_10920_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4344..4652
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1Z2J4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_10920_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4672..5145)
DNA (474bp) protein (158aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_10920_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5504..6535
DNA (1032bp) protein (344aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_10920_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6535..7641
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DGC6_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU76565.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_10920_11
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7684..8823
DNA (1140bp) protein (380aa)
NAD/NADP transhydrogenase subunit alpha bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD/NADP transhydrogenase subunit alpha
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_10920_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8820..9167
DNA (348bp) protein (116aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_10920_13
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9164..9382
DNA (219bp) protein (73aa)
NAD(P) transhydrogenase subunit beta bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
NAD(P) transhydrogenase subunit beta
Tax=RBG_13_Deltaproteobacteria_65_10_curated
Displaying 13 items

View Taxonomy