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PLM4_65_b1_redo_sep16_scaffold_3814

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3814_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1440)
DNA (1440bp) protein (480aa)
hypothetical protein Tax=Salisaeta longa RepID=UPI0003B7BBFB
alpha-2-macroglobulin domain protein 2
Alpha-2-macroglobulin domain protein 2 {ECO:0000313|EMBL:AHG93764.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_3814_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1437..2540)
DNA (1104bp) protein (368aa)
alcohol dehydrogenase (EC:1.1.1.14)
Alcohol dehydrogenase, zinc-binding domain protein Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN59_9FIRM
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_3814_3
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(3070..4881)
DNA (1812bp) protein (604aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO40158.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3814_4
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(4943..6019)
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9ULA0_SPIAZ
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_b1_redo_sep16_scaffold_3814_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6147..6902)
DNA (756bp) protein (252aa)
SAM-dependent methyltransferase Tax=Thiobacillus thioparus RepID=UPI00036175C0
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_3814_6
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6902..7675)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYJ1_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04188.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_65_b1_redo_sep16_scaffold_3814_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7733..8830
DNA (1098bp) protein (366aa)
Glucose sorbosone dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2KFF9_9PROT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EKE76095.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
glucose sorbosone dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_3814_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9078..9485
DNA (408bp) protein (136aa)
transposase IS200-family protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
transposase IS200-family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_3814_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9687..11684)
DNA (1998bp) protein (666aa)
Putative acetoacetyl-CoA synthetase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9J1_GEMAT
acetoacetyl-CoA synthase
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:AHG88021.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_3814_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11978..12577
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06612.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM4_65_b1_redo_sep16_scaffold_3814_11
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12624..13160)
DNA (537bp) protein (179aa)
Putative uncharacterized protein Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S3E6_SHEAM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL98902.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
PLM4_65_b1_redo_sep16_scaffold_3814_12
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13225..13833)
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DRD2_THIND
dhaR_[H]; Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGA32149.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
PLM4_65_b1_redo_sep16_scaffold_3814_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13949..14272)
DNA (324bp) protein (108aa)
mRNA interferase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH91_DESAR
transcriptional modulator of MazE/toxin MazF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_3814_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14269..14520)
DNA (252bp) protein (84aa)
SpoVT/AbrB domain-containing protein
SpoVT/AbrB domain-containing protein bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3814_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15270..15866)
DNA (597bp) protein (199aa)
farnesyl cysteine carboxyl-methyltransferase Tax=Xanthobacteraceae RepID=UPI000370C0F0
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EFI52206.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
PLM4_65_b1_redo_sep16_scaffold_3814_16
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17011..17562)
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL84726.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
PLM4_65_b1_redo_sep16_scaffold_3814_17
unknown

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comp(17753..18100)
DNA (348bp) protein (116aa)

This feature has no annotations

Displaying 17 items

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