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PLM4_65_b1_redo_sep16_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_131_1
unknown

Not on your lists

2..409
DNA (408bp) protein (136aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_131_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

417..707
DNA (291bp) protein (97aa)
Tsl2232 protein Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DGT1_THEEB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92888.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_131_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

742..882
DNA (141bp) protein (47aa)
protein of unknown function DUF86
Uncharacterized protein {ECO:0000313|EMBL:AHG92871.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_131_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1236..1613)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Rhodopirellula europaea SH398 RepID=M5SB22_9PLAN
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM4_65_b1_redo_sep16_scaffold_131_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1805..3796)
DNA (1992bp) protein (664aa)
Kef-type potassium transporter, NAD-binding protein Tax=Geobacter sulfurreducens RepID=D7AHY5_GEOSK
Kef-type potassium transporter NAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3905..6319
DNA (2415bp) protein (805aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC94_9ZZZZ
glutamyl peptidase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6381..6755)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1AE41_9ZZZZ
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_131_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6756..9983)
DNA (3228bp) protein (1076aa)
amidohydrolase Tax=Salisaeta longa RepID=UPI0003B39622
WD-40-like repeat-containing amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_131_9
unknown

Not on your lists

comp(10086..10448)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_131_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10460..11557)
DNA (1098bp) protein (366aa)
tRNA-specific 2-thiouridylase MnmA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_131_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11554..12726)
DNA (1173bp) protein (391aa)
Aminotransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G3_GEMAT
aminotransferase
Aminotransferase {ECO:0000313|EMBL:BAH38173.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_131_12
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

12803..13312
DNA (510bp) protein (170aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00035F622E
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
PLM4_65_b1_redo_sep16_scaffold_131_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13326..14051)
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
Bacillithiol biosynthesis deacetylase, BshB1
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_131_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14198..14590
DNA (393bp) protein (131aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F69F08
S23 ribosomal protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_65_b1_redo_sep16_scaffold_131_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14606..15847)
DNA (1242bp) protein (414aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
MacB-like periplasmic core domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_131_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15876..17120)
DNA (1245bp) protein (415aa)
MacB-like periplasmic core domain protein
antimicrobial peptide ABC transporter permease; K02004 putative ABC transport system permease protein bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_131_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17202..18434)
DNA (1233bp) protein (411aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_131_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18431..19675)
DNA (1245bp) protein (415aa)
Putative ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19678..20379)
DNA (702bp) protein (234aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
ABC transporter related protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20376..21626)
DNA (1251bp) protein (417aa)
Secretion protein HlyD family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH38189.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_131_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21651..23141)
DNA (1491bp) protein (497aa)
Outer membrane efflux protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_22
unknown

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comp(23242..23829)
DNA (588bp) protein (196aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_131_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23840..24529)
DNA (690bp) protein (230aa)
Creatininase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WN66_METH6
Creatininase
Creatininase {ECO:0000313|EMBL:AHG90443.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_131_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24557..28579
DNA (4023bp) protein (1341aa)
Putative two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28576..29781
DNA (1206bp) protein (402aa)
aminotransferase (EC:2.6.1.-) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_131_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29816..30742
DNA (927bp) protein (309aa)
Sulfoxide reductase catalytic subunit YedY Tax=Anaeromyxobacter sp. (strain K) RepID=YEDY_ANASK
sulfite oxidase subunit YedY
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_131_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30748..31398
DNA (651bp) protein (217aa)
Sulfoxide reductase heme-binding subunit YedZ Tax=Thiocapsa marina 5811 RepID=F9U9U4_9GAMM
ferric reductase domain containing protein transmembrane component domain
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_131_28

Not on your lists

31599..33245
DNA (1647bp) protein (549aa)
peptidase M28 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6CEEA
Uncharacterized protein {ECO:0000313|EMBL:KKN71668.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase M28
PLM4_65_b1_redo_sep16_scaffold_131_29
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33208..33600)
DNA (393bp) protein (131aa)
Short chain dehydrogenase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CD57_STRBB
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:ADI10904.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM4_65_b1_redo_sep16_scaffold_131_30
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(33597..35774)
DNA (2178bp) protein (726aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003743641
putative glycosyl hydrolase
Tax=RBG_13_Aminicenantes_63_10_curated
Displaying items 1-30 of 63 in total

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