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PLM4_65_b1_redo_sep16_scaffold_641

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_641_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_641_2
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(253..531)
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFU4_9BURK
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
PLM4_65_b1_redo_sep16_scaffold_641_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

622..867
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMH6_HALO1
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_641_4
unknown

Not on your lists

comp(872..2041)
DNA (1170bp) protein (390aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_641_5
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2113..2886)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Calothrix sp. PCC 7507 RepID=K9PLG5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33801.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM4_65_b1_redo_sep16_scaffold_641_6
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2883..4130)
DNA (1248bp) protein (416aa)
Uncharacterized protein Tax=Calothrix sp. PCC 7507 RepID=K9PMP3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33802.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM4_65_b1_redo_sep16_scaffold_641_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4127..4927)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Calothrix sp. PCC 7507 RepID=K9PKX9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY33803.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM4_65_b1_redo_sep16_scaffold_641_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5069..7120
DNA (2052bp) protein (684aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L177_HALH1
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_641_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7146..7664
DNA (519bp) protein (173aa)
Putative uncharacterized protein Tax=uncultured bacterium 270 RepID=E3T6U1_9BACT
cupin
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_641_10
RLO_PLX_64_10, Bacteria

Not on your lists

7661..8422
DNA (762bp) protein (254aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DBDF1
3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_641_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8431..9684
DNA (1254bp) protein (418aa)
Sodium:dicarboxylate symporter Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN69_9GAMM
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AHG87929.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_641_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9694..10302)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZV10_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75980.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_b1_redo_sep16_scaffold_641_13

Not on your lists

comp(10286..11389)
DNA (1104bp) protein (368aa)
NAD-dependent epimerase/dehydratase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9S3_GEMAT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49271.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent epimerase/dehydratase family protein
PLM4_65_b1_redo_sep16_scaffold_641_14
unknown

Not on your lists

comp(11530..11820)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_641_15
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11896..12351)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Paenibacillus mucilaginosus RepID=F8FLC4_PAEMK
Uncharacterized protein {ECO:0000313|EMBL:GAO01436.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_641_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12348..13469)
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376D25D
Phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AHG88922.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_641_17
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13510..14421)
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DF36_9BURK
beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:EKU81866.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
PLM4_65_b1_redo_sep16_scaffold_641_18
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14418..15980)
DNA (1563bp) protein (521aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABQ90126.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
HEAT repeat-containing PBS lyase
PLM4_65_b1_redo_sep16_scaffold_641_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16085..18007)
DNA (1923bp) protein (641aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A717_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38027.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_641_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18010..18396)
DNA (387bp) protein (129aa)
BlaI family transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A716_GEMAT
BlaI family transcriptional regulator
BlaI family transcriptional regulator {ECO:0000313|EMBL:BAH38026.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_641_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18457..18867)
DNA (411bp) protein (137aa)
Putative thiol-disulfide oxidoreductase DCC Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UPU3_MYCVA
putative thiol-disulfide oxidoreductase DCC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_641_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18864..19307)
DNA (444bp) protein (148aa)
id=12554314 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_641_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19322..19744)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94078.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM4_65_b1_redo_sep16_scaffold_641_24
RBG_13_OP11_Woesebacteria_46_13_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(19747..19926)
DNA (180bp) protein (60aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI00036D225C
hypothetical protein
Tax=RBG_13_OP11_Woesebacteria_46_13_curated
PLM4_65_b1_redo_sep16_scaffold_641_25
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19938..20369)
DNA (432bp) protein (144aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Aha1 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_641_26
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20500..21147
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Eikenella corrodens CC92I RepID=V7IFA6_EIKCO
Protein dedA {ECO:0000313|EMBL:CDH46944.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_641_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21171..21815)
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A856_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_641_28
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21909..22388)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4INC9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ11632.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_641_29
unknown

Not on your lists

comp(22399..22923)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_641_30
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22920..23201)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FV89_STIAD bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 1-30 of 42 in total

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