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PLM4_65_b1_redo_sep16_scaffold_8845

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8845_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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3..278
DNA (276bp) protein (92aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AEP12333.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AEP12333.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Enoyl-CoA hydratase/carnithine racemase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ46_CHLTF
PLM4_65_b1_redo_sep16_scaffold_8845_2
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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346..1590
DNA (1245bp) protein (415aa)
ATP-dependent DNA helicase RecQ Tax=Leptolyngbya sp. PCC 6406 RepID=L8LBP8_9CYAN
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ACK69871.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
PLM4_65_b1_redo_sep16_scaffold_8845_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1658..2971
DNA (1314bp) protein (438aa)
hypothetical protein bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_8845_4
Planococcus sp. PAMC 21323, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2995..3996
DNA (1002bp) protein (334aa)
UPF0365 protein A1A1_03422 Tax=Planococcus antarcticus DSM 14505 RepID=I4X828_9BACL
hypothetical protein
UPF0365 protein Plano_1274 {ECO:0000256|HAMAP-Rule:MF_01562}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus sp. PAMC 21323.;"
PLM4_65_b1_redo_sep16_scaffold_8845_5
unknown

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3998..4567
DNA (570bp) protein (190aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8845_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4684..5913
DNA (1230bp) protein (410aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH38743.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAH38743.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Acyl-CoA dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
PLM4_65_b1_redo_sep16_scaffold_8845_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6216..7775
DNA (1560bp) protein (520aa)
Ribonuclease G Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT
ribonuclease, Rne/Rng family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_8845_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7862..8182
DNA (321bp) protein (107aa)
50S ribosomal protein L21 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
50S ribosomal protein L21
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_8845_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


8184..8447
DNA (264bp) protein (88aa)
50S ribosomal protein L27 Tax=Dyella ginsengisoli RepID=UPI0003473BAA
rpmA; 50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_8845_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8477..10420)
DNA (1944bp) protein (648aa)
Peptidase M16 inactive domain protein Tax=Cesiribacter andamanensis AMV16 RepID=M7MY46_9BACT
processing peptidase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_8845_11
unknown

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comp(10366..10584)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_8845_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10581..11921)
DNA (1341bp) protein (447aa)
hypothetical protein Tax=Lewinella persica RepID=UPI00036355EC
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain protein
PLM4_65_b1_redo_sep16_scaffold_8845_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12129..12977)
DNA (849bp) protein (283aa)
dat; hypothetical protein (EC:2.6.1.21)
D-alanine aminotransferase Dat Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G3B4_9DELT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_8845_14
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12974..13999)
DNA (1026bp) protein (342aa)
Uncharacterized protein Tax=Arthrobacter sp. AK-YN10 RepID=U1Y9M4_9MICC
Mo-co oxidoreductase dimerization domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KII26710.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
Displaying 14 items

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