ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_6688

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6688_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
alkyl hydroperoxide reductase Tax=Spirosoma luteum RepID=UPI00036EB236
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_6688_2
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

744..1376
DNA (633bp) protein (211aa)
Regulator of chromosome condensation RCC1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X0_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23603.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
PLM4_65_b1_redo_sep16_scaffold_6688_3
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1415..2290
DNA (876bp) protein (292aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00036EA6D4
peptidoglycan-associated (lipo)protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM4_65_b1_redo_sep16_scaffold_6688_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

3683..5083
DNA (1401bp) protein (467aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT5_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53621.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
protease
PLM4_65_b1_redo_sep16_scaffold_6688_5
unknown

Not on your lists

5146..5631
DNA (486bp) protein (162aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6688_6
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5705..6034)
DNA (330bp) protein (110aa)
Class-V aminotransferase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JJ0_SYMTH
class-V aminotransferase
Class-V aminotransferase {ECO:0000313|EMBL:BAD42160.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM4_65_b1_redo_sep16_scaffold_6688_7
Janthinobacterium sp. J3, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6155..6667
DNA (513bp) protein (171aa)
Putative uncharacterized protein ORFU8 Tax=Janthinobacterium sp. (strain J3) RepID=Q84IJ2_JANS3
Putative uncharacterized protein ORFU8 {ECO:0000313|EMBL:BAC56736.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain J3).;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6688_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6688..9291
DNA (2604bp) protein (868aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036988F8
peptidase M14 family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_6688_9
unknown

Not on your lists

9598..10113
DNA (516bp) protein (172aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6688_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(10101..11534)
DNA (1434bp) protein (478aa)
L-glutamine synthetase bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
glutamine synthetase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_6688_11
unknown

Not on your lists

11582..12151
DNA (570bp) protein (190aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6688_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12151..13038
DNA (888bp) protein (296aa)
histone deacetylase superfamily protein bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
histone deacetylase superfamily protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_6688_13
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(13033..15084)
DNA (2052bp) protein (684aa)
serine/threonine protein kinase
Serine/threonine protein kinase bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Caldithrix_48_16_curated
Displaying 13 items

View Taxonomy